RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 HOXA2O43364 376 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 TSPAN1O60635 241 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 HIP1RO75146 1068 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 SKIP12755 728 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 LIG1P18858 919 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 SLC12A3P55017 1021 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 FAM189BP81408 668 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 RAD51AP2Q09MP3 1159 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 CAMK1Q14012 370 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 DHX8Q14562 1220 aaKnown RBP14.48□□□□□ -0.09
TCOF1-209ENST00000506630 PCBP1Q15365 356 aaKnown RBP eCLIP14.48□□□□□ -0.09
TCOF1-209ENST00000506630 CDCA2Q69YH5 1023 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-209ENST00000506630 C1orf186Q6ZWK4 172 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 ABI1Q8IZP0 508 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 SYT2Q8N9I0 419 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-209ENST00000506630 PRSS33Q8NF86 280 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 CPB2Q96IY4 423 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 EPSTI1Q96J88 318 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 MSLNLQ96KJ4 702 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 PHOX2BQ99453 314 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 KIFC3Q9BVG8 833 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 C2orf40Q9H1Z8 148 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 FAM105AQ9NUU6 356 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 MRPL42Q9Y6G3 142 aaKnown RBP14.48□□□□□ -0.09
TCOF1-209ENST00000506630 MORC2Q9Y6X9 1032 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-209ENST00000506630 C5orf42Q9H799 3197 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 YEATS4O95619 227 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 ATF7P17544 494 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-209ENST00000506630 DNAJB1P25685 340 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 AXLP30530 894 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 HOXA11P31270 313 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-209ENST00000506630 RAB27AP51159 221 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 ZXDAP98168 799 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 NCBP1Q09161 790 aaKnown RBP14.47□□□□□ -0.09
TCOF1-209ENST00000506630 DMP1Q13316 513 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-209ENST00000506630 MCM6Q14566 821 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 TMEM132AQ24JP5 1023 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 LONRF3Q496Y0 759 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 SPOUT1Q5T280 376 aaKnown RBP14.47□□□□□ -0.09
TCOF1-209ENST00000506630 IER5LQ5T953 404 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 NOTUMQ6P988 496 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 USP49Q70CQ1 688 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 GPBP1Q86WP2 473 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 FBXL6Q8N531 539 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 EFHBQ8N7U6 833 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 LRRC15Q8TF66 581 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 RAD54LQ92698 747 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 DRC1Q96MC2 740 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 PRMT7Q9NVM4 692 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-209ENST00000506630 CCDC39Q9UFE4 941 aa14.47□□□□□ -0.09
TCOF1-209ENST00000506630 CCDC169A6NNP5 214 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 B4GALT5O43286 388 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 PPP6R2O75170 966 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 BRD1O95696 1058 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 EOMESO95936 686 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 PRKCBP05771 671 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 ARF4P18085 180 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-209ENST00000506630 GUCY2CP25092 1073 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 PEX3P56589 373 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-209ENST00000506630 DNM1Q05193 864 aaKnown RBP14.46□□□□□ -0.09
TCOF1-209ENST00000506630 COASYQ13057 564 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 MAPK6Q16659 721 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 AMHR2Q16671 573 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 CLLU1OSQ5K130 101 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 ZNF598Q86UK7 904 aaKnown RBP14.46□□□□□ -0.09
TCOF1-209ENST00000506630 DAW1Q8N136 415 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 SMRP1Q8NCR6 262 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 SPPL3Q8TCT6 385 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 HELQQ8TDG4 1101 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 LARP4BQ92615 738 aaKnown RBP14.46□□□□□ -0.09
TCOF1-209ENST00000506630 LPPQ93052 612 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 PRIMPOLQ96LW4 560 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 TIPINQ9BVW5 301 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 TRAIPQ9BWF2 469 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 TMEM117Q9H0C3 514 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 IRF2BPLQ9H1B7 796 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 BLOC1S4Q9NUP1 217 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 RNF19AQ9NV58 838 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 KCND2Q9NZV8 630 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 ZNF318Q5VUA4 2279 aa14.46□□□□□ -0.09
TCOF1-209ENST00000506630 NPHP3-ACAD11A0A0J9YXS1 232 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 LOC730098B7Z3J9 87 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 ITGB1P05556 798 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 KRT18P05783 430 aaKnown RBP14.45□□□□□ -0.1
TCOF1-209ENST00000506630 NCLP19338 710 aaKnown RBP14.45□□□□□ -0.1
TCOF1-209ENST00000506630 NRIP1P48552 1158 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 MAPK7Q13164 816 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 UBXN11Q5T124 520 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 RBM23Q86U06 439 aaKnown RBP14.45□□□□□ -0.1
TCOF1-209ENST00000506630 CDR2LQ86X02 465 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-209ENST00000506630 POF1BQ8WVV4 589 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 PGBD4Q96DM1 585 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 CCDC51Q96ER9 411 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 EIF2AQ9BY44 585 aaKnown RBP14.45□□□□□ -0.1
TCOF1-209ENST00000506630 TRIM6Q9C030 488 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-209ENST00000506630 KMT5AQ9NQR1 393 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 CLEC1BQ9P126 229 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms