RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 KIAA1024Q9UPX6 916 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 DENND4AQ7Z401 1863 aa18.56■□□□□ 0.56
PDLIM7-215ENST00000506161 VWA8A3KMH1 1905 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 LRRIQ4A6NIV6 560 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 NCK2O43639 380 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 NPTXRO95502 500 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 SKIP12755 728 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 CYP11B2P19099 503 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 PPM1AP35813 382 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 MLH1P40692 756 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 COASYQ13057 564 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 KANK3Q6NY19 840 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 SYCE2Q6PIF2 218 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 TMC7Q7Z402 723 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 DAW1Q8N136 415 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 LRRC15Q8TF66 581 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 CCDC43Q96MW1 224 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 CCDC113Q9H0I3 377 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 S1PR5Q9H228 398 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 BHMT2Q9H2M3 363 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 DDX19AQ9NUU7 478 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 LRWD1Q9UFC0 647 aa18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 USP15Q9Y4E8 981 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-215ENST00000506161 CLASP2O75122 1294 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 AKAP5P24588 427 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 SCNN1GP51170 649 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 TFDP1Q14186 410 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 EEF1DP3Q658K8 133 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 NOTUMQ6P988 496 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 ADHFE1Q8IWW8 467 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 VPS52Q8N1B4 723 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 PGBD4Q96DM1 585 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 PHOX2BQ99453 314 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 FZD8Q9H461 694 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 MYH15Q9Y2K3 1946 aa18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 PDCD11Q14690 1871 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-215ENST00000506161 ARHGEF35A5YM69 484 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 ARL5CA6NH57 179 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 INPPL1O15357 1258 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 ITGA4P13612 1032 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 AXLP30530 894 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 ALDH7A1P49419 539 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 ATP2C1P98194 919 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 RNASELQ05823 741 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 MAPK7Q13164 816 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 TAS1R1Q7RTX1 841 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 COLGALT2Q8IYK4 626 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 MRPL43Q8N983 215 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 ERMNQ8TAM6 284 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 RABGGTAQ92696 567 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 RUSC1Q9BVN2 902 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 PDZD7Q9H5P4 517 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 KLK14Q9P0G3 267 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 HCFC2Q9Y5Z7 792 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 WDFY4Q6ZS81 3184 aa18.53■□□□□ 0.56
PDLIM7-215ENST00000506161 CNTNAP2Q9UHC6 1331 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 A0A1B0GUA9 196 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 NRP1O14786 923 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 EFEMP2O95967 443 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 KRT17Q04695 432 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 GRIN1Q05586 938 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 DSC1Q08554 894 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 PDE12Q6L8Q7 609 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 ANKRD54Q6NXT1 300 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 TMEM184AQ6ZMB5 413 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 DDX53Q86TM3 631 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 MCPH1Q8NEM0 835 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 SUSD6Q92537 303 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 PPP2R3CQ969Q6 453 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 TMEM169Q96HH4 297 aa18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 NGRNQ9NPE2 291 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 PUF60Q9UHX1 559 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 MTCL1Q9Y4B5 1905 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-215ENST00000506161 CXCL14O95715 111 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 SSBP05455 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 EPCAMP16422 314 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 IGFBP6P24592 240 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 PRPHP41219 470 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 CUL4AQ13619 759 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 PDIA5Q14554 519 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 SMC1AQ14683 1233 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 PTPN14Q15678 1187 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 HAUS3Q68CZ6 603 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 TAS1R3Q7RTX0 852 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 URGCPQ8TCY9 931 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 PLIN2Q99541 437 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 CDCA3Q99618 268 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 PAAF1Q9BRP4 392 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 SMC3Q9UQE7 1217 aa18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 PRG3Q9Y2Y8 225 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-215ENST00000506161 CITO14578 2027 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 MYO10Q9HD67 2058 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 WEE2P0C1S8 567 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 CTSAP10619 480 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 LIG1P18858 919 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms