RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 FKBP3Q00688 224 aaKnown RBP7.89□□□□□ -1.15
NUP54-204ENST00000506098 MYL5Q02045 173 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 TMEM62Q0P6H9 643 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 FAAP100Q0VG06 881 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 STRN3Q13033 797 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 BFSP2Q13515 415 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 UVSSAQ2YD98 709 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 FBXO47Q5MNV8 452 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 ZNF618Q5T7W0 954 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 SLFN12LQ6IEE8 588 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 TSHZ1Q6ZSZ6 1077 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 NELFCDQ8IXH7 590 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 SYCP3Q8IZU3 236 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 AOPEPQ8N6M6 819 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 USP38Q8NB14 1042 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 NOC3LQ8WTT2 800 aaKnown RBP7.89□□□□□ -1.15
NUP54-204ENST00000506098 TMEM40Q8WWA1 233 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 ZNF668Q96K58 619 aaPredicted RBP7.89□□□□□ -1.15
NUP54-204ENST00000506098 CEP63Q96MT8 703 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 OSMRQ99650 979 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 TSG101Q99816 390 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
NUP54-204ENST00000506098 RBSNQ9H1K0 784 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 HSD3B7Q9H2F3 369 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 PTPRHQ9HD43 1115 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 AGPAT3Q9NRZ7 376 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 NOD1Q9Y239 953 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 TNFSF13BQ9Y275 285 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 A0A1B0GUA9 196 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 TTLL13PA6NNM8 815 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 CLGNO14967 610 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 MAPK13O15264 365 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 TSPAN1O60635 241 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 TOM1L1O75674 476 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 PARNO95453 639 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 FGFR1OPO95684 399 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 SELPP16109 830 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 ZNF18P17022 549 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 ARF4P18085 180 aaPredicted RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 SFPQP23246 707 aaKnown RBP eCLIP7.88□□□□□ -1.15
NUP54-204ENST00000506098 RPL13P26373 211 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 ADSSP30520 456 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 HOXA11P31270 313 aaPredicted RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 ATN1P54259 1190 aaPredicted RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 MARSP56192 900 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 STX17P56962 302 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 TLE2Q04725 743 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 PRPF4BQ13523 1007 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 LRRC26Q2I0M4 334 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 TRIM60Q495X7 471 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 COL13A1Q5TAT6 717 aaPredicted RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 CDKAL1Q5VV42 579 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 LRRC55Q6ZSA7 311 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 HS2ST1Q7LGA3 356 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 FILIP1Q7Z7B0 1213 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 LUZP1Q86V48 1076 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 FAM228AQ86W67 206 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 IRF2BP1Q8IU81 584 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 CSGALNACT2Q8N6G5 542 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 FBXL18Q96ME1 805 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 MKNK1Q9BUB5 465 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 NOC4LQ9BVI4 516 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 TARS2Q9BW92 718 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 SRRTQ9BXP5 876 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 HAPLN2Q9GZV7 340 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 IKZF4Q9H2S9 585 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 THAP9Q9H5L6 903 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 TBX21Q9UL17 535 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 NFE2L3Q9Y4A8 694 aa7.88□□□□□ -1.15
NUP54-204ENST00000506098 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.88□□□□□ -1.15
NUP54-204ENST00000506098 A0A0B4J269 797 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 LRRC10BA6NIK2 292 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 BECN2A8MW95 431 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 HNRNPDLO14979 420 aaKnown RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 N4BP3O15049 544 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 CETN3O15182 167 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 GPR182O15218 404 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 CLIC2O15247 247 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 B4GALT5O43286 388 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 FAM189A1O60320 539 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 PQBP1O60828 265 aaKnown RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 CSDE1O75534 798 aaKnown RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 RPS6KA5O75582 802 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 ERLIN2O94905 339 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 GNA14O95837 355 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 LDHAP00338 332 aaKnown RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 NR3C1P04150 777 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 CLTBP09497 229 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 NR2F2P24468 414 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 LIG4P49917 911 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 POU5F1Q01860 360 aaKnown RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 ENPEPQ07075 957 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 MCL1Q07820 350 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 NCBP1Q09161 790 aaKnown RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 ADAM9Q13443 819 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 GSE1Q14687 1217 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 LPIN1Q14693 890 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 MBTPS1Q14703 1052 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 GPNMBQ14956 572 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms