RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 PITHD1Q9GZP4 211 aaPredicted RBP7.56□□□□□ -1.2
CHD1-204ENST00000505982 EVLQ9UI08 416 aaPredicted RBP7.56□□□□□ -1.2
CHD1-204ENST00000505982 WASF3Q9UPY6 502 aa7.56□□□□□ -1.2
CHD1-204ENST00000505982 A0A0A6YYJ9 748 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 IL13RA1P78552 427 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 PICALMQ13492 652 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 ADRM1Q16186 407 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 DGKDQ16760 1214 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 WDR72Q3MJ13 1102 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 MUM1L1Q5H9M0 696 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 LMBR1LQ6UX01 489 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 SLC41A1Q8IVJ1 513 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 GLB1L2Q8IW92 636 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 EXOC8Q8IYI6 725 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 STPG3Q8N7X2 389 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 TXNDC5Q8NBS9 432 aaKnown RBP7.55□□□□□ -1.2
CHD1-204ENST00000505982 OR5AN1Q8NGI8 311 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 SH3RF3Q8TEJ3 882 aaPredicted RBP7.55□□□□□ -1.2
CHD1-204ENST00000505982 NRG4Q8WWG1 115 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 MVB12AQ96EY5 273 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 CLIC6Q96NY7 704 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 FAM204AQ9H8W3 233 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 CHST12Q9NRB3 414 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 ST6GALNAC2Q9UJ37 374 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 COMMD10Q9Y6G5 202 aa7.55□□□□□ -1.2
CHD1-204ENST00000505982 CCDC154A6NI56 674 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 IFIT2P09913 472 aaKnown RBP7.54□□□□□ -1.2
CHD1-204ENST00000505982 TACR2P21452 398 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 ADCY8P40145 1251 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 CD83Q01151 205 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 SAFBQ15424 915 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHD1-204ENST00000505982 PGS1Q32NB8 556 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 CCDC178Q5BJE1 867 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 GAREM2Q75VX8 874 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 OTOP2Q7RTS6 562 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 BMP8AQ7Z5Y6 402 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 PJA1Q8NG27 643 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 LCORQ96JN0 433 aaPredicted RBP7.54□□□□□ -1.2
CHD1-204ENST00000505982 FAM193BQ96PV7 902 aaPredicted RBP7.54□□□□□ -1.2
CHD1-204ENST00000505982 SYT3Q9BQG1 590 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 MAGEL2Q9UJ55 1249 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 CROTQ9UKG9 612 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 INTUQ9ULD6 942 aa7.54□□□□□ -1.2
CHD1-204ENST00000505982 CUTAO60888 179 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 IL18BPO95998 194 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 FXR1P51114 621 aaKnown RBP eCLIP7.53□□□□□ -1.2
CHD1-204ENST00000505982 MGAT5Q09328 741 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 KANK2Q63ZY3 851 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 IL31Q6EBC2 164 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 GRAMD4Q6IC98 578 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 BTNL9Q6UXG8 535 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 MIGA2Q7L4E1 593 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 LIMS2Q7Z4I7 341 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 SPRED1Q7Z699 444 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 CERS3Q8IU89 383 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 GLB1L3Q8NCI6 653 aaPredicted RBP7.53□□□□□ -1.2
CHD1-204ENST00000505982 C1GALT1C1Q96EU7 318 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 DYDC2Q96IM9 177 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 WRNIP1Q96S55 665 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 SCAND2PQ9GZW5 306 aaPredicted RBP7.53□□□□□ -1.2
CHD1-204ENST00000505982 DMRT3Q9NQL9 472 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 TSC22D4Q9Y3Q8 395 aa7.53□□□□□ -1.2
CHD1-204ENST00000505982 DDX3XO00571 662 aaKnown RBP eCLIP7.52□□□□□ -1.21
CHD1-204ENST00000505982 CYR61O00622 381 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 HTRA2O43464 458 aaPredicted RBP7.52□□□□□ -1.21
CHD1-204ENST00000505982 LAMTOR5O43504 91 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 GSPT1P15170 499 aaKnown RBP7.52□□□□□ -1.21
CHD1-204ENST00000505982 NEK3P51956 506 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 ITGA1P56199 1179 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 LLGL1Q15334 1064 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 STILQ15468 1287 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 KLHDC10Q6PID8 442 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 FAM180AQ6UWF9 173 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 CCDC149Q6ZUS6 474 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 PLEKHH3Q7Z736 793 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 DENND1CQ8IV53 801 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 PPP1R35Q8TAP8 253 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 HDAC10Q969S8 669 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 CDK5RAP1Q96SZ6 601 aaKnown RBP7.52□□□□□ -1.21
CHD1-204ENST00000505982 GREM2Q9H772 168 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
CHD1-204ENST00000505982 LIMCH1Q9UPQ0 1083 aa7.52□□□□□ -1.21
CHD1-204ENST00000505982 C9orf118A6NHY6 69 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 NOMO1Q15155 1222 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 CCDC157Q569K6 752 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 PRR31Q5SQ13 230 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 CXXC5Q7LFL8 322 aaKnown RBP7.51□□□□□ -1.21
CHD1-204ENST00000505982 SRGAP1Q7Z6B7 1085 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 DPF2Q92785 391 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 PAWRQ96IZ0 340 aaKnown RBP7.51□□□□□ -1.21
CHD1-204ENST00000505982 MRIQ9BWK5 157 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 ZNF700Q9H0M5 742 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 KCND1Q9NSA2 647 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.51□□□□□ -1.21
CHD1-204ENST00000505982 SAE1Q9UBE0 346 aaPredicted RBP7.51□□□□□ -1.21
CHD1-204ENST00000505982 DNAI1Q9UI46 699 aa7.51□□□□□ -1.21
CHD1-204ENST00000505982 APAF1O14727 1248 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms