RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PDXDC1Q6P996 788 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 MOXD1Q6UVY6 613 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 AGMOQ6ZNB7 445 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 GPR152Q8TDT2 470 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
NEDD9-210ENST00000505589 RIN2Q8WYP3 895 aaPredicted RBP11.08□□□□□ -0.64
NEDD9-210ENST00000505589 RNF26Q9BY78 433 aaPredicted RBP11.08□□□□□ -0.64
NEDD9-210ENST00000505589 FAM126AQ9BYI3 521 aaPredicted RBP11.08□□□□□ -0.64
NEDD9-210ENST00000505589 UNC45AQ9H3U1 944 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 NCDNQ9UBB6 729 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 PCDHGA2Q9Y5H1 932 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 VPS13AQ96RL7 3174 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 CYP3A7-CYP3A51PA0A087WV96 503 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 KANSL1LA0AUZ9 987 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 ANHXE9PGG2 379 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 TEX28O15482 410 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 ERLIN2O94905 339 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 POMCP01189 267 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 DCNP07585 359 aaKnown RBP11.07□□□□□ -0.64
NEDD9-210ENST00000505589 CYP3A7P24462 503 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 CDC27P30260 824 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 RFC5P40937 340 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 QARSP47897 775 aaKnown RBP11.07□□□□□ -0.64
NEDD9-210ENST00000505589 NRLP54845 237 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 POU5F1BQ06416 359 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 MXD4Q14582 209 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-210ENST00000505589 UVSSAQ2YD98 709 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 GALNT17Q6IS24 598 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 NOTUMQ6P988 496 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 COLGALT2Q8IYK4 626 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 PJA1Q8NG27 643 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 RSAD2Q8WXG1 361 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 LENG9Q96B70 501 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 TRIM6Q9C030 488 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-210ENST00000505589 SLKQ9H2G2 1235 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-210ENST00000505589 IFT122Q9HBG6 1241 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 CHST7Q9NS84 486 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-210ENST00000505589 MRPS17Q9Y2R5 130 aaKnown RBP11.07□□□□□ -0.64
NEDD9-210ENST00000505589 GIT1Q9Y2X7 761 aa11.07□□□□□ -0.64
NEDD9-210ENST00000505589 TBC1D4O60343 1298 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 XYLBO75191 536 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 TADA2AO75478 443 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 P4HBP07237 508 aaKnown RBP11.06□□□□□ -0.64
NEDD9-210ENST00000505589 HNRNPA1P09651 372 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEDD9-210ENST00000505589 SRGAP2CP0DJJ0 459 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 FSHRP23945 695 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 LMNB2Q03252 620 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 DRP2Q13474 957 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 TFDP1Q14186 410 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 RSPO4Q2I0M5 234 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-210ENST00000505589 FBXL16Q8N461 479 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 TBCKQ8TEA7 893 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 PRPF31Q8WWY3 499 aaKnown RBP11.06□□□□□ -0.64
NEDD9-210ENST00000505589 CEP170P1Q96L14 293 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 FAM20AQ96MK3 541 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 MYADMQ96S97 322 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 NAP1L4Q99733 375 aaKnown RBP11.06□□□□□ -0.64
NEDD9-210ENST00000505589 DLGAP2Q9P1A6 1054 aa11.06□□□□□ -0.64
NEDD9-210ENST00000505589 DNAH14Q0VDD8 3507 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 MED19A0JLT2 244 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 ARL5CA6NH57 179 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 TGM5O43548 720 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 MARCH6O60337 910 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 FOXD2O60548 495 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 RFPL2O75678 378 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 ZMYND10O75800 440 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 PSMA5P28066 241 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 SLC44A4Q53GD3 710 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 ZBTB41Q5SVQ8 909 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 LIN9Q5TKA1 542 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 GET4Q7L5D6 327 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 PALB2Q86YC2 1186 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 BCL7CQ8WUZ0 217 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 CEP89Q96ST8 783 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 RTKNQ9BST9 563 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 VN1R3Q9BXE9 311 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 SPATA6Q9NWH7 488 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 ZSCAN32Q9NX65 697 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 CDH7Q9ULB5 785 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 RAB23Q9ULC3 237 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 PRG3Q9Y2Y8 225 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-210ENST00000505589 NUMBLQ9Y6R0 609 aa11.05□□□□□ -0.64
NEDD9-210ENST00000505589 MEIS3P2A8K0S8 358 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 BAG4O95429 457 aaKnown RBP11.04□□□□□ -0.64
NEDD9-210ENST00000505589 IFNAR1P17181 557 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 HOXA9P31269 272 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 HOXA11P31270 313 aaPredicted RBP11.04□□□□□ -0.64
NEDD9-210ENST00000505589 DSC1Q08554 894 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 LAMTOR4Q0VGL1 99 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 ELAVL2Q12926 359 aaKnown RBP11.04□□□□□ -0.64
NEDD9-210ENST00000505589 HTR4Q13639 388 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 UGCGQ16739 394 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 LILRA6Q6PI73 481 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 B3GNT9Q6UX72 402 aa11.04□□□□□ -0.64
NEDD9-210ENST00000505589 ANO5Q75V66 913 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms