RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 FAM228AQ86W67 206 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 C12orf56Q8IXR9 622 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 TMEM199Q8N511 208 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 HPS3Q969F9 1004 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 BICD1Q96G01 975 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 PPP1R16BQ96T49 567 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 TSG101Q99816 390 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 TRAIPQ9BWF2 469 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 FGFBP2Q9BYJ0 223 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 IFIH1Q9BYX4 1025 aaKnown RBP11.25□□□□□ -0.61
RFC1-210ENST00000505077 PPP1R12CQ9BZL4 782 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 MINDY3Q9H8M7 445 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 PRDM5Q9NQX1 630 aaPredicted RBP11.25□□□□□ -0.61
RFC1-210ENST00000505077 TNFSF13BQ9Y275 285 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 NOC2LQ9Y3T9 749 aaKnown RBP11.25□□□□□ -0.61
RFC1-210ENST00000505077 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 A0A1B0GUA9 196 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 PPP1R3GB7ZBB8 358 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 CALUO43852 315 aaPredicted RBP11.24□□□□□ -0.61
RFC1-210ENST00000505077 EFCAB14O75071 495 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 PRPF6O94906 941 aaKnown RBP11.24□□□□□ -0.61
RFC1-210ENST00000505077 GHRP10912 638 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 ARF4P18085 180 aaPredicted RBP11.24□□□□□ -0.61
RFC1-210ENST00000505077 RAB27AP51159 221 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 PAK1Q13153 545 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 MYBPC2Q14324 1141 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 NFIL3Q16649 462 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 KYAT1Q16773 422 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 PLEKHG4Q58EX7 1191 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 ATF7IP2Q5U623 682 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 CENPPQ6IPU0 288 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 SMYD4Q8IYR2 804 aaPredicted RBP11.24□□□□□ -0.61
RFC1-210ENST00000505077 GLIS3Q8NEA6 775 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 ACO2Q99798 780 aaKnown RBP11.24□□□□□ -0.61
RFC1-210ENST00000505077 BPIFA3Q9BQP9 254 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 FUCA2Q9BTY2 467 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 KCTD10Q9H3F6 313 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 ERVK-5Q9HDB9 667 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 RWDD2AQ9UIY3 292 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 PADI3Q9ULW8 664 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 TRAF3IP3Q9Y228 551 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
RFC1-210ENST00000505077 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 STYXL1Q9Y6J8 313 aa11.24□□□□□ -0.61
RFC1-210ENST00000505077 TRIM43BA6NCK2 446 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 CLDN3O15551 220 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 SKIP12755 728 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 GARTP22102 1010 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 PROZP22891 400 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 CCNE1P24864 410 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
RFC1-210ENST00000505077 CD52P31358 61 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 CYP2C18P33260 490 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 HOXD13P35453 343 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.61
RFC1-210ENST00000505077 NOLC1Q14978 699 aaKnown RBP eCLIP11.23□□□□□ -0.61
RFC1-210ENST00000505077 ZNF568Q3ZCX4 644 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 ISM2Q6H9L7 571 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 SLC27A1Q6PCB7 646 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 LRSAM1Q6UWE0 723 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 MPZL3Q6UWV2 235 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
RFC1-210ENST00000505077 SEPT8Q92599 483 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 P2RX5Q93086 422 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 TRIM43Q96BQ3 446 aaPredicted RBP11.23□□□□□ -0.61
RFC1-210ENST00000505077 ZNF668Q96K58 619 aaPredicted RBP11.23□□□□□ -0.61
RFC1-210ENST00000505077 AGO3Q9H9G7 860 aaKnown RBP11.23□□□□□ -0.61
RFC1-210ENST00000505077 AGPAT3Q9NRZ7 376 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 ST3GAL5Q9UNP4 418 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 UMODL1Q5DID0 1318 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 KIAA1671Q9BY89 1806 aa11.23□□□□□ -0.61
RFC1-210ENST00000505077 B4GALT5O43286 388 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 NBNO60934 754 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 BAIAP3O94812 1187 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 FGFR1OPO95684 399 aaKnown RBP11.22□□□□□ -0.61
RFC1-210ENST00000505077 LDHAP00338 332 aaKnown RBP11.22□□□□□ -0.61
RFC1-210ENST00000505077 MCF2P10911 925 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
RFC1-210ENST00000505077 ZSCAN20P17040 1043 aaPredicted RBP11.22□□□□□ -0.61
RFC1-210ENST00000505077 HOXA11P31270 313 aaPredicted RBP11.22□□□□□ -0.61
RFC1-210ENST00000505077 POU5F1Q01860 360 aaKnown RBP11.22□□□□□ -0.61
RFC1-210ENST00000505077 FPGSQ05932 587 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 MCL1Q07820 350 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 KCNA1Q09470 495 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 ANO6Q4KMQ2 910 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 CNKSR3Q6P9H4 555 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 NELFCDQ8IXH7 590 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 NELFBQ8WX92 580 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 RSPH1Q8WYR4 309 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 TARS2Q9BW92 718 aaKnown RBP11.22□□□□□ -0.61
RFC1-210ENST00000505077 PDZD7Q9H5P4 517 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 SLC24A3Q9HC58 644 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms