RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	C2CD2L	O14523	706 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	TSPAN1	O60635	241 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	USO1	O60763	962 aa	Known RBP	18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	CTDNEP1	O95476	244 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	SOD2	P04179	222 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	HOXA11	P31270	313 aa	Predicted RBP	18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	MCM7	P33993	719 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	MRE11	P49959	708 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	NUBP1	P53384	320 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	ORC2	Q13416	577 aa	Predicted RBP	18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	PTPN14	Q15678	1187 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	SLC27A1	Q6PCB7	646 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	TMC5	Q6UXY8	1006 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	C8orf76	Q96K31	380 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	HSD17B14	Q9BPX1	270 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	ADPGK	Q9BRR6	497 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	RAB34	Q9BZG1	259 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	C2orf40	Q9H1Z8	148 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	MINDY3	Q9H8M7	445 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	TUFT1	Q9NNX1	390 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	PARP2	Q9UGN5	583 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	LIMCH1	Q9UPQ0	1083 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	STK24	Q9Y6E0	443 aa		18.16	■□□□□ 0.5
DDR1-256	ENST00000505066	ARHGEF35	A5YM69	484 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	ARL5C	A6NH57	179 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	EPCAM	P16422	314 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	RFX1	P22670	979 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	MLH1	P40692	756 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	GLUD2	P49448	558 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	SPIRE1	Q08AE8	756 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	PPP2R5A	Q15172	486 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	HAUS3	Q68CZ6	603 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	CYP26C1	Q6V0L0	522 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	ZDHHC14	Q8IZN3	488 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	C12orf76	Q8N812	135 aa	Predicted RBP	18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	NSUN7	Q8NE18	718 aa	Known RBP	18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	PIGO	Q8TEQ8	1089 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	CPB2	Q96IY4	423 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	KLHL5	Q96PQ7	755 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	GAD1	Q99259	594 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	NFKBIZ	Q9BYH8	718 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	PIDD1	Q9HB75	910 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	PRMT7	Q9NVM4	692 aa	Predicted RBP	18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	KIF3A	Q9Y496	699 aa		18.15	■□□□□ 0.5
DDR1-256	ENST00000505066	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	MEIS3P2	A8K0S8	358 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	C2CD4D	B7Z1M9	353 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	TADA2A	O75478	443 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	DDHD2	O94830	711 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	GLUD1	P00367	558 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	FDPS	P14324	419 aa	Known RBP	18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	RARRES1	P49788	294 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	HMGN5	P82970	282 aa	Known RBP	18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	UBXN11	Q5T124	520 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	MAEA	Q7L5Y9	396 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	TMEM173	Q86WV6	379 aa	Predicted RBP	18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	DEPTOR	Q8TB45	409 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	IFT74	Q96LB3	600 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	PRIMPOL	Q96LW4	560 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	HERC2P3	Q9BVR0	1158 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	LIMD1	Q9UGP4	676 aa		18.14	■□□□□ 0.49
DDR1-256	ENST00000505066	FAM205C	A6NFA0	338 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	ZBTB39	O15060	712 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	NPTXR	O95502	500 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	CNP	P09543	421 aa	Known RBP	18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	WEE2	P0C1S8	567 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	ARL2	P36404	184 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	RBM25	P49756	843 aa	Known RBP	18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	SCNN1G	P51170	649 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	MBTD1	Q05BQ5	628 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	CAPS	Q13938	189 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	USP41	Q3LFD5	358 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	EARS2	Q5JPH6	523 aa	Known RBP	18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	C15orf39	Q6ZRI6	1047 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	GPR149	Q86SP6	731 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	SLC22A17	Q8WUG5	538 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	LLPH	Q9BRT6	129 aa	Known RBP	18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	EIF2A	Q9BY44	585 aa	Known RBP	18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	FBXL21	Q9UKT6	434 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	LOXHD1	Q8IVV2	1947 aa		18.13	■□□□□ 0.49
DDR1-256	ENST00000505066	N4BP3	O15049	544 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	ARF4	P18085	180 aa	Predicted RBP	18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	AVPR2	P30518	371 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	CLCN4	P51793	760 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	GRIK3	Q13003	919 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	MAPK6	Q16659	721 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	COLGALT2	Q8IYK4	626 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	SMG8	Q8ND04	991 aa	Known RBP	18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	TNFRSF25	Q93038	417 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	XPNPEP1	Q9NQW7	623 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	KIAA1671	Q9BY89	1806 aa		18.12	■□□□□ 0.49
DDR1-256	ENST00000505066	MUC6	Q6W4X9	2439 aa		18.11	■□□□□ 0.49
DDR1-256	ENST00000505066	POTEM	A6NI47	508 aa		18.11	■□□□□ 0.49
DDR1-256	ENST00000505066	JAK2	O60674	1132 aa		18.11	■□□□□ 0.49
DDR1-256	ENST00000505066	DTNB	O60941	627 aa		18.11	■□□□□ 0.49
DDR1-256	ENST00000505066	OR52Z1	P0C646	297 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms