RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ZNF286BP0CG31 522 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 SMIM10L2AP0DMW4 78 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 SMIM10L2BP0DMW5 78 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 GTF2H1P32780 548 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 CYP2J2P51589 502 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 VAMP7P51809 220 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 ZBED6P86452 979 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 PURAQ00577 322 aaKnown RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 KCNMA1Q12791 1236 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 CETN1Q12798 172 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 DRP2Q13474 957 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 SYCP1Q15431 976 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 MAP3K21Q5TCX8 1036 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 NFRKBQ6P4R8 1299 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 CHRDL2Q6WN34 429 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 SRGAP1Q7Z6B7 1085 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 ZNF410Q86VK4 478 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 KIAA0319LQ8IZA0 1049 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 LRRC71Q8N4P6 559 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 PCSK9Q8NBP7 692 aaKnown RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 KIAA1524Q8TCG1 905 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 CPLX3Q8WVH0 158 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 TRAPPC12Q8WVT3 735 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 POMGNT1Q8WZA1 660 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 SLC35C1Q96A29 364 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 BICD1Q96G01 975 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 PCMTD1Q96MG8 357 aaPredicted RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 MAP7D2Q96T17 732 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 MTG1Q9BT17 334 aaPredicted RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 MRPL4Q9BYD3 311 aaKnown RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 INO80BQ9C086 356 aaPredicted RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 CCDC113Q9H0I3 377 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 PCIF1Q9H4Z3 704 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 MMRN2Q9H8L6 949 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 HMX1Q9NP08 348 aaPredicted RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 PLCB1Q9NQ66 1216 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
DDX41-203ENST00000504781 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 ADGRA3Q8IWK6 1321 aa11.06□□□□□ -0.64
DDX41-203ENST00000504781 A0A0B4J269 797 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 HNRNPDLO14979 420 aaKnown RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 CLDN3O15551 220 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 EXTL3O43909 919 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 ZNF500O60304 480 aaPredicted RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 EVI5O60447 810 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 TOM1L1O75674 476 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 GYPCP04921 128 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 TRIM21P19474 475 aaKnown RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 CST5P28325 142 aaPredicted RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 CASP14P31944 242 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 KRT9P35527 623 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 PHKA2P46019 1235 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 ADKP55263 362 aaKnown RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 IGBP1P78318 339 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 BFSP1Q12934 665 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 KYAT1Q16773 422 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 GBP6Q6ZN66 633 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 TSHZ1Q6ZSZ6 1077 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 GPD1LQ8N335 351 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 RDH13Q8NBN7 331 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 KLHDC9Q8NEP7 349 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 NEK11Q8NG66 645 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 PAWRQ96IZ0 340 aaKnown RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 PRIMPOLQ96LW4 560 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 ACO2Q99798 780 aaKnown RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 BAG1Q99933 345 aaPredicted RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 CBWD1Q9BRT8 395 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 KIFC3Q9BVG8 833 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 IKZF4Q9H2S9 585 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 KCNF1Q9H3M0 494 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 IFT122Q9HBG6 1241 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 PAK6Q9NQU5 681 aaPredicted RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 KCND1Q9NSA2 647 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 PRMT7Q9NVM4 692 aaPredicted RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 FBXL5Q9UKA1 691 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 AGO2Q9UKV8 859 aaKnown RBP11.05□□□□□ -0.64
DDX41-203ENST00000504781 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
DDX41-203ENST00000504781 TTC26A0AVF1 554 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 MFAP3LO75121 409 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 CABYRO75952 493 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
DDX41-203ENST00000504781 FECHP22830 423 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 HOXC8P31273 242 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 HNRNPH3P31942 346 aaKnown RBP11.04□□□□□ -0.64
DDX41-203ENST00000504781 FMO5P49326 533 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 FXR1P51114 621 aaKnown RBP eCLIP11.04□□□□□ -0.64
DDX41-203ENST00000504781 CLCN3P51790 818 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 CLDN10P78369 228 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 CCZ1BP86790 482 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 CCZ1P86791 482 aaPredicted RBP11.04□□□□□ -0.64
DDX41-203ENST00000504781 CDK17Q00537 523 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 BEX3Q00994 111 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 NCBP1Q09161 790 aaKnown RBP11.04□□□□□ -0.64
DDX41-203ENST00000504781 SURF1Q15526 300 aa11.04□□□□□ -0.64
DDX41-203ENST00000504781 SNRNP35Q16560 246 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms