RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
DDR1-253ENST00000504651 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDR1-253ENST00000504651 MORC3Q14149 939 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 DSC3Q14574 896 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 BMT2Q1RMZ1 405 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 TMEM240Q5SV17 173 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 EEF1DP3Q658K8 133 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 SLC27A1Q6PCB7 646 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 RBM43Q6ZSC3 357 aaKnown RBP15.3■□□□□ 0.04
DDR1-253ENST00000504651 FAM43BQ6ZT52 329 aaPredicted RBP15.3■□□□□ 0.04
DDR1-253ENST00000504651 OTOP2Q7RTS6 562 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 ZNF507Q8TCN5 953 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.3■□□□□ 0.043e-7■□□□□ 11.3
DDR1-253ENST00000504651 C1orf112Q9NSG2 853 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 MAPK8IP1Q9UQF2 711 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 TNFSF13BQ9Y275 285 aa15.3■□□□□ 0.04
DDR1-253ENST00000504651 ABHD14A-ACY1A0A1B0GW23 586 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 NPTXRO95502 500 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 HARSP12081 509 aaKnown RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 HOXA11P31270 313 aaPredicted RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 KCNJ6P48051 423 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 STIM1Q13586 685 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 DCAF4L1Q3SXM0 396 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 MPZL3Q6UWV2 235 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 C16orf59Q7L2K0 433 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 APBB1IPQ7Z5R6 666 aaPredicted RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 GUF1Q8N442 669 aaKnown RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 TCHPQ9BT92 498 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 UBE2OQ9C0C9 1292 aaKnown RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 TSPYL2Q9H2G4 693 aaPredicted RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 MTIF3Q9H2K0 278 aaKnown RBP15.29■□□□□ 0.04
DDR1-253ENST00000504651 IKZF4Q9H2S9 585 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 RGS18Q9NS28 235 aa15.29■□□□□ 0.04
DDR1-253ENST00000504651 A0A1B0GUA9 196 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 TISP43B9A030 160 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 TOM1L1O75674 476 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 PPP1R2P41236 205 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 PRCPP42785 496 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 RAB27AP51159 221 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 WDR5P61964 334 aaKnown RBP15.28■□□□□ 0.04
DDR1-253ENST00000504651 NOLC1Q14978 699 aaKnown RBP eCLIP15.28■□□□□ 0.04
DDR1-253ENST00000504651 KNOP1Q1ED39 458 aaKnown RBP15.28■□□□□ 0.04
DDR1-253ENST00000504651 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 UBXN11Q5T124 520 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 SLC39A4Q6P5W5 647 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 SASS6Q6UVJ0 657 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 HS2ST1Q7LGA3 356 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 ZBTB33Q86T24 672 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 GDF15Q99988 308 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 EIF2AQ9BY44 585 aaKnown RBP15.28■□□□□ 0.04
DDR1-253ENST00000504651 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 CDT1Q9H211 546 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 FAM105AQ9NUU6 356 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 RALGAPA2Q2PPJ7 1873 aa15.28■□□□□ 0.04
DDR1-253ENST00000504651 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.27■□□□□ 0.04
DDR1-253ENST00000504651 C9IYK1 514 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 ANKRD63C9JTQ0 380 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 CLDN3O15551 220 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 AMHP03971 560 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 SKIP12755 728 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 BMP6P22004 513 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 PROZP22891 400 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 HOXD13P35453 343 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 NLRP12P59046 1061 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 KLHL10Q6JEL2 608 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 ARMCX5Q6P1M9 558 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.27■□□□□ 0.04
DDR1-253ENST00000504651 SLC24A5Q71RS6 500 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 RTN4RL1Q86UN2 441 aaPredicted RBP15.27■□□□□ 0.04
DDR1-253ENST00000504651 HERVK_113Q902F9 699 aa15.27■□□□□ 0.04
DDR1-253ENST00000504651 ZBTB45Q96K62 511 aaPredicted RBP15.27■□□□□ 0.04
DDR1-253ENST00000504651 TYW1Q9NV66 732 aaKnown RBP15.27■□□□□ 0.04
DDR1-253ENST00000504651 ENPP3O14638 875 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 ABLIM1O14639 778 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 PSMA7O14818 248 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 CALUO43852 315 aaPredicted RBP15.26■□□□□ 0.03
DDR1-253ENST00000504651 LETM1O95202 739 aaPredicted RBP15.26■□□□□ 0.03
DDR1-253ENST00000504651 MCF2P10911 925 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 DEFB103AP81534 67 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 MCL1Q07820 350 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 C9orf50Q5SZB4 431 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 SLFN12LQ6IEE8 588 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 ECHDC2Q86YB7 292 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 HACE1Q8IYU2 909 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 ADSSL1Q8N142 457 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 RNF169Q8NCN4 708 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 GOLGA5Q8TBA6 731 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 POMGNT1Q8WZA1 660 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 RNPC3Q96LT9 517 aaKnown RBP15.26■□□□□ 0.03
DDR1-253ENST00000504651 MSTO1Q9BUK6 570 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 TRAIPQ9BWF2 469 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 APOL6Q9BWW8 343 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 NXF3Q9H4D5 531 aaKnown RBP15.26■□□□□ 0.03
DDR1-253ENST00000504651 PTPRHQ9HD43 1115 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 AGPAT3Q9NRZ7 376 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
DDR1-253ENST00000504651 DACH1Q9UI36 760 aa15.26■□□□□ 0.03
DDR1-253ENST00000504651 LRFN2Q9ULH4 789 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms