RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 ZNF263O14978 683 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 ICMTO60725 284 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 COBLO75128 1261 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 EYA4O95677 639 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 ATP1A1P05023 1023 aaKnown RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 EEF2P13639 858 aaKnown RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 IDEP14735 1019 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 EIF4A3P38919 411 aaKnown RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 PAFAH1B1P43034 410 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 NPEPPSP55786 919 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 VSNL1P62760 191 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 APBA1Q02410 837 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 KLRC3Q07444 240 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 ZNF211Q13398 564 aaPredicted RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 PICALMQ13492 652 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 NAB2Q15742 525 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 SLC18A3Q16572 532 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 KNOP1Q1ED39 458 aaKnown RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 CCDC40Q4G0X9 1142 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 FAM83BQ5T0W9 1011 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 PDE12Q6L8Q7 609 aaKnown RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 EMBQ6PCB8 327 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 KCNK18Q7Z418 384 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 ATCAYQ86WG3 371 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 FBXO11Q86XK2 927 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 C2CD5Q86YS7 1000 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 SIAH1Q8IUQ4 282 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 COG1Q8WTW3 980 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 MMS19Q96T76 1030 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 MAF1Q9H063 256 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 DEF6Q9H4E7 631 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 MMRN2Q9H8L6 949 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 EHMT1Q9H9B1 1298 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 GINM1Q9NU53 330 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 CWC15Q9P013 229 aaKnown RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 PNMA2Q9UL42 364 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 PCDHGC5Q9Y5F6 944 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 ZNF646O15015 1829 aaPredicted RBP9.63□□□□□ -0.87
CASC9-201ENST00000504531 SIPA1L1O43166 1804 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 ARFGEF1Q9Y6D6 1849 aa9.63□□□□□ -0.87
CASC9-201ENST00000504531 A0A0A6YYK5 440 aaPredicted RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 LRRC53A6NM62 1247 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 M0R082 166 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 NOL4O94818 638 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 IVLP07476 585 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 BMP3P12645 472 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 HOXD8P13378 290 aaPredicted RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 LMNB1P20700 586 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 SNRPFP62306 86 aaKnown RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 ADAM9Q13443 819 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 GIT2Q14161 759 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 CLUL1Q15846 466 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 ECM1Q16610 540 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 ABCB5Q2M3G0 1257 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 HERC4Q5GLZ8 1057 aaPredicted RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 SYDE2Q5VT97 1194 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 ALS2CLQ60I27 953 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 STXBP4Q6ZWJ1 553 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 RRAGAQ7L523 313 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 DYMQ7RTS9 669 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 GPBP1Q86WP2 473 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 MICALL1Q8N3F8 863 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 NOA1Q8NC60 698 aaKnown RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 ZNF417Q8TAU3 575 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 GOLGA5Q8TBA6 731 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 NEK9Q8TD19 979 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 SCFD1Q8WVM8 642 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 LENG9Q96B70 501 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 ZNF587Q96SQ5 575 aaPredicted RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 DNAJC18Q9H819 358 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 MAP3K20Q9NYL2 800 aaKnown RBP9.62□□□□□ -0.87
CASC9-201ENST00000504531 STARD13Q9Y3M8 1113 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 LOXHD1Q8IVV2 1947 aa9.62□□□□□ -0.87
CASC9-201ENST00000504531 KIF13BQ9NQT8 1826 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 MPHOSPH10O00566 681 aaKnown RBP9.61□□□□□ -0.87
CASC9-201ENST00000504531 MMP20O60882 483 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 LILRB5O75023 590 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 ALBP02768 609 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 PDGFAP04085 211 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 CCDC172P0C7W6 258 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 EPB41P11171 864 aaKnown RBP9.61□□□□□ -0.87
CASC9-201ENST00000504531 SERPINB4P48594 390 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 GHRHRQ02643 423 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 ICA1Q05084 483 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 PPP2R5CQ13362 524 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 ALCAMQ13740 583 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 UBE2SQ16763 222 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 CFAP221Q4G0U5 840 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 ARSHQ5FYA8 562 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 EMC10Q5UCC4 262 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 TTC39BQ5VTQ0 682 aaPredicted RBP9.61□□□□□ -0.87
CASC9-201ENST00000504531 NCAPH2Q6IBW4 605 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 NIPA1Q7RTP0 329 aa9.61□□□□□ -0.87
CASC9-201ENST00000504531 FAM35AQ86V20 835 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms