RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ALDH7A1P49419 539 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 ATP2C1P98194 919 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 KRT17Q04695 432 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 CBX2Q14781 532 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 HAUS3Q68CZ6 603 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 ANKRD54Q6NXT1 300 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 MAEAQ7L5Y9 396 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 CDR2LQ86X02 465 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 DAW1Q8N136 415 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 CNNM3Q8NE01 707 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 ERMNQ8TAM6 284 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 AUTS2Q8WXX7 1259 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 PRIMPOLQ96LW4 560 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 ZFP42Q96MM3 310 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 TMEM175Q9BSA9 504 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 ENTPD7Q9NQZ7 604 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 LRWD1Q9UFC0 647 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 RAPGEFL1Q9UHV5 662 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 NOL7Q9UMY1 257 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 HCFC2Q9Y5Z7 792 aa15.51■□□□□ 0.07
PDLIM7-211ENST00000504318 FSD2A1L4K1 749 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 F8W810 466 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 LAD1O00515 517 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 POMCP01189 267 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 CDC25AP30304 524 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 MAPK7Q13164 816 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 SMC1AQ14683 1233 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 PTPN14Q15678 1187 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 HYIQ5T013 277 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 TMC7Q7Z402 723 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 VPS52Q8N1B4 723 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 GAD1Q99259 594 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 LRFN3Q9BTN0 628 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 CXCL16Q9H2A7 254 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 BHMT2Q9H2M3 363 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 PDZD7Q9H5P4 517 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 POLD4Q9HCU8 107 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 CDH22Q9UJ99 828 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 KIAA1024Q9UPX6 916 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 FAM50BQ9Y247 325 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 PLXNA3P51805 1871 aa15.5■□□□□ 0.07
PDLIM7-211ENST00000504318 CARNS1A5YM72 827 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 LRRIQ4A6NIV6 560 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 NRP1O14786 923 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 ITGA4P13612 1032 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 COL9A1P20849 921 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 CCT6AP40227 531 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 MLH1P40692 756 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 SCNN1GP51170 649 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 CUL4AQ13619 759 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 SLC27A1Q6PCB7 646 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 LRRC15Q8TF66 581 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 SLC22A17Q8WUG5 538 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 KIFC3Q9BVG8 833 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 GBP3Q9H0R5 595 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 UBN1Q9NPG3 1134 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 DDX19AQ9NUU7 478 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 PRMT7Q9NVM4 692 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 KANSL3Q9P2N6 904 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 USP20Q9Y2K6 914 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 GIT1Q9Y2X7 761 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 C2orf16Q68DN1 1984 aa15.49■□□□□ 0.07
PDLIM7-211ENST00000504318 ARHGEF35A5YM69 484 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 E9PMD0 336 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 NPTXRO95502 500 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 AKAP5P24588 427 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 NAMPTP43490 491 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 MCM2P49736 904 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 GNL2Q13823 731 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 NAB2Q15742 525 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 RILPL1Q5EBL4 403 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 TAS1R3Q7RTX0 852 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 URGCPQ8TCY9 931 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 SNX29Q8TEQ0 813 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 ZNF318Q5VUA4 2279 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 VWA8A3KMH1 1905 aa15.48■□□□□ 0.07
PDLIM7-211ENST00000504318 MYH11P35749 1972 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 FAM86C2PA6NEL3 165 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 ACKR2O00590 384 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 PTGESO14684 152 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 CXCL14O95715 111 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 SSTR3P32745 418 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 RNASELQ05823 741 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 HERC4Q5GLZ8 1057 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 NT5DC1Q5TFE4 455 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 EEF1DP3Q658K8 133 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 LLGL2Q6P1M3 1020 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 C1orf186Q6ZWK4 172 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 TAS1R1Q7RTX1 841 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 CCDC43Q96MW1 224 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 RUSC1Q9BVN2 902 aa15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 PHF7Q9BWX1 381 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 RBM19Q9Y4C8 960 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-211ENST00000504318 ABLIM1O14639 778 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 DCXO43602 365 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 SOD2P04179 222 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 PRKCBP05771 671 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms