RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 HNRNPDLO14979 420 aaKnown RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 PNMA6AP0CW24 399 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 ATP4AP20648 1035 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 TNFAIP3P21580 790 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 NAP1L1P55209 391 aaKnown RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 APBA1Q02410 837 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 GCNT1Q02742 428 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 GPS2Q13227 327 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 GRM1Q13255 1194 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 MXD4Q14582 209 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 PSMD6Q15008 389 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 IER5Q5VY09 327 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 PHLDB3Q6NSJ2 640 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 PPP1R2P3Q6NXS1 205 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 ZPBP2Q6X784 338 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 SEPT14Q6ZU15 432 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 HDXQ7Z353 690 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 ZNF467Q7Z7K2 595 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 RHOT2Q8IXI1 618 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 FAM71AQ8IYT1 594 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 LRRC57Q8N9N7 239 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 DEPTORQ8TB45 409 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 CTNNBL1Q8WYA6 563 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 BSNDQ8WZ55 320 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 RFFLQ8WZ73 363 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 POMGNT1Q8WZA1 660 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 SHC3Q92529 594 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 TAF4BQ92750 862 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 SELENOOQ9BVL4 669 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 ACBD3Q9H3P7 528 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 PCIF1Q9H4Z3 704 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 VIPAS39Q9H9C1 493 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 SUCLA2Q9P2R7 463 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 SALL4Q9UJQ4 1053 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 TFR2Q9UP52 801 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 TMEM150BA6NC51 233 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 K7ERI5 159 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 MAP2K7O14733 419 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 ASAP2O43150 1006 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 STRNO43815 780 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 GRIN3BO60391 1043 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 PALMO75781 387 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 ADRB2P07550 413 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 YBX3P16989 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 TNFRSF8P28908 595 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 GCLCP48506 637 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 GCLMP48507 274 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 LIG4P49917 911 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 BPIFB4P59827 614 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 POU5F1BQ06416 359 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 GABPB1Q06547 395 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 TTLL12Q14166 644 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 RPS6KA1Q15418 735 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 SURF1Q15526 300 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 PPP2R5EQ16537 467 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 LONRF2Q1L5Z9 754 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 MTERF2Q49AM1 385 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 BEND6Q5SZJ8 279 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 CELF3Q5SZQ8 465 aaKnown RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 GPAT2Q6NUI2 795 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 SLC39A4Q6P5W5 647 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 C15orf39Q6ZRI6 1047 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 ZNF677Q86XU0 584 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 CBWD2Q8IUF1 395 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 EIF1ADQ8N9N8 165 aaKnown RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 SPATA4Q8NEY3 305 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 TPCN2Q8NHX9 752 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 PSPC1Q8WXF1 523 aaKnown RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 OPTNQ96CV9 577 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 SLC10A4Q96EP9 437 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 NT5C1BQ96P26 610 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 MMP19Q99542 508 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 AGPAT1Q99943 283 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 ISCUQ9H1K1 167 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 C2orf40Q9H1Z8 148 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 IKZF4Q9H2S9 585 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 TAF1DQ9H5J8 278 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 UBE2TQ9NPD8 197 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 RAB20Q9NX57 234 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 TTC7AQ9ULT0 858 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-210ENST00000504289 L1RE1Q9UN81 338 aa10.6□□□□□ -0.71
COL1A1-210ENST00000504289 IGKV6-21A0A0C4DH24 114 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 LRRIQ3A6PVS8 624 aaPredicted RBP10.59□□□□□ -0.71
COL1A1-210ENST00000504289 FOXN3O00409 490 aaPredicted RBP10.59□□□□□ -0.71
COL1A1-210ENST00000504289 BUB1O43683 1085 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 ADCY3O60266 1144 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 MTA2O94776 668 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 GGPS1O95749 300 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 TBC1D8O95759 1140 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 CETPP11597 493 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 GLRA2P23416 452 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 GALCP54803 685 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 ERVK-9P63128 1117 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 DLG4P78352 724 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 IRF5Q13568 498 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms