RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ADAMTS8Q9UP79 889 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 RPH3AQ9Y2J0 694 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TK2O00142 265 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 GMFGO60234 142 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 RHOBTB3O94955 611 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CTNNB1P35222 781 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CNGA2Q16280 664 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SPOUT1Q5T280 376 aaKnown RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 COPS6Q7L5N1 327 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 HACE1Q8IYU2 909 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 KLHL29Q96CT2 875 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 BBS2Q9BXC9 721 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 PNO1Q9NRX1 252 aaKnown RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 HPF1Q9NWY4 346 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SYBUQ9NX95 663 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 MBD2Q9UBB5 411 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CPSF3Q9UKF6 684 aaKnown RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 AP3M1Q9Y2T2 418 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ABCA8O94911 1581 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 MAGEA13PA6NCF6 341 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 LRRC10BA6NIK2 292 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SCGB1D2O95969 90 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 TRIM27P14373 513 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 GPC3P51654 580 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 LIMK1P53667 647 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SSTP61278 116 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SLC9A5Q14940 896 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 FAM189A2Q15884 450 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ADCK5Q3MIX3 580 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 C1orf146Q5VVC0 180 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 FAM122CQ6P4D5 195 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 HORMAD1Q86X24 394 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 FAM20CQ8IXL6 584 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CARNMT1Q8N4J0 409 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF566Q969W8 418 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF845Q96IR2 970 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CITED4Q96RK1 184 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SMYD3Q9H7B4 428 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CYP4F11Q9HBI6 524 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 TRAF3IP3Q9Y228 551 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 FAM47DPA6NHR8 397 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CCRL2O00421 344 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 BIRC5O15392 142 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 F13A1P00488 732 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ETV1P50549 477 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 RNASE9P60153 205 aaKnown RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 PPP2R2AP63151 447 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 USF2Q15853 346 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 AKIRIN2Q53H80 203 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC28AQ8IWP9 274 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CATSPER1Q8NEC5 780 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ARL8AQ96BM9 186 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 APOL2Q9BQE5 337 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 LBHD1Q9BQE6 289 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SPTLC3Q9NUV7 552 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CUEDC1Q9NWM3 386 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 MID2Q9UJV3 735 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 H0YJX3 145 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 IDH3BO43837 385 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 LRRN2O75325 713 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 PDE6AP16499 860 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 MX1P20591 662 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 CAPZA2P47755 286 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 RBM6P78332 1123 aaKnown RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ATP13A5Q4VNC0 1218 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ARHGAP36Q6ZRI8 547 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 DSG4Q86SJ6 1040 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 PLD3Q8IV08 490 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ANKRD53Q8N9V6 530 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 ZFAND2BQ8WV99 257 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SHC3Q92529 594 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 BRF1Q92994 677 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 MTERF3Q96E29 417 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 THAP11Q96EK4 314 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 MXD3Q9BW11 206 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 KATNAL1Q9BW62 490 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 BRINP2Q9C0B6 783 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 C8orf33Q9H7E9 229 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 PCMTD2Q9NV79 361 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 POLR3BQ9NW08 1133 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 STX18Q9P2W9 335 aaKnown RBP6.62□□□□□ -1.35
CLCN3-204ENST00000504131 DUSP12Q9UNI6 340 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 SIK3Q9Y2K2 1263 aa6.62□□□□□ -1.35
CLCN3-204ENST00000504131 TYW5A2RUC4 315 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 CFAP73A6NFT4 308 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 ATG7O95352 703 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 NCAM1P13591 858 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 AP3M2P53677 418 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 GALNT1Q10472 559 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 PPIL2Q13356 520 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 KRR1Q13601 381 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 NUTM2DQ5VT03 806 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 BBS7Q8IWZ6 715 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 USP38Q8NB14 1042 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC197Q8NCU1 140 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 TEX47Q8TBZ9 253 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 NUDT12Q9BQG2 462 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 PIH1D1Q9NWS0 290 aaKnown RBP6.61□□□□□ -1.35
CLCN3-204ENST00000504131 AXIN2Q9Y2T1 843 aa6.61□□□□□ -1.35
CLCN3-204ENST00000504131 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms