RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 AGO2Q9UKV8 859 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 A0A1B0GTH6 734 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 TADA3O75528 432 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 TRPA1O75762 1119 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 DEUP1Q05D60 604 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 LDHDQ86WU2 507 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 C2orf69Q8N8R5 385 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 IGDCC4Q8TDY8 1250 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 NOP53Q9NZM5 478 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 TTC7AQ9ULT0 858 aaPredicted RBP17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 ZNF609O15014 1411 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 KRT14P02533 472 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 NBPF9Q3BBW0 867 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 FAM47EQ6ZV65 393 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 ACAD11Q709F0 780 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 CDKL3Q8IVW4 592 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 PARVAQ9NVD7 372 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 PCSK1NQ9UHG2 260 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 GOLGA8MH3BSY2 632 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 ATP1A1P05023 1023 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 EFNA5P52803 228 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 COPS2P61201 443 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 NFIXQ14938 502 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 PDCD2Q16342 344 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 HEATR6Q6AI08 1181 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 AGPAT1Q99943 283 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 SPATA31D1Q6ZQQ2 1576 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 ESYT3A0FGR9 886 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 APOEP02649 317 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 MAGEA9P43362 315 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 GPS1Q13098 491 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 DACT3Q96B18 629 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 ATP6V1G3Q96LB4 118 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 MRPL46Q9H2W6 279 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 MTMR4Q9NYA4 1195 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 SPAG7O75391 227 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 BCAR1P56945 870 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 DUOXA2Q1HG44 320 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 BEND6Q5SZJ8 279 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 ELMSAN1Q6PJG2 1045 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 C7orf25Q9BPX7 421 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 IQSEC2Q5JU85 1478 aa17.57■□□□□ 0.4
PCDHA1-203ENST00000504120 ITIH6Q6UXX5 1313 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ZNF189O75820 626 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 BRAFP15056 766 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ROR1Q01973 937 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 KIF19Q2TAC6 998 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ADSSL1Q8N142 457 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ATP11CQ8NB49 1132 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 EXT2Q93063 718 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ZFP69BQ9UJL9 534 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 LMCD1Q9NZU5 365 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 INTUQ9ULD6 942 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ASAP2O43150 1006 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 SLC1A1P43005 524 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 DPYDQ12882 1025 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 SPATA4Q8NEY3 305 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 VPS11Q9H270 941 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 VWDEQ8N2E2 1590 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 RTN2O75298 545 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ZFXP17010 805 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 DRP2Q13474 957 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 NKX1-1Q15270 411 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 KIAA1755Q5JYT7 1200 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ITPRIPL1Q6GPH6 555 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 TADA2BQ86TJ2 420 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 RNF168Q8IYW5 571 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 SPATA33Q96N06 139 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 ACAP3Q96P50 834 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 TRIM33Q9UPN9 1127 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 SF3B3Q15393 1217 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 GRAMD1BQ3KR37 738 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 PPM1NQ8N819 430 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 IFT43Q96FT9 208 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 MMP19Q99542 508 aa17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-203ENST00000504120 TBX3O15119 743 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 YWHABP31946 246 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 PDIA2Q13087 525 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 EFHC2Q5JST6 749 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 KCNV1Q6PIU1 500 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 SETD1BQ9UPS6 1966 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 FOXP2O15409 715 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 RHOBTB3O94955 611 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 HP1BP3Q5SSJ5 553 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 NRBF2Q96F24 287 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 MRPL40Q9NQ50 206 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 KRT82Q9NSB4 513 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 FAM217BQ9NTX9 383 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 CREB3O43889 395 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 SRGNP10124 158 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 EEF1B2P24534 225 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 SCN4BQ8IWT1 228 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 COG1Q8WTW3 980 aa17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 THOC1Q96FV9 657 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-203ENST00000504120 SPATS2LQ9NUQ6 558 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms