RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TSEN2Q8NCE0 465 aaKnown RBP18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 FAM20AQ96MK3 541 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
HMGXB3-201ENST00000502717 PAX7P23759 505 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 TNFRSF8P28908 595 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 GRAPQ13588 217 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 KRT39Q6A163 491 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 GRAPLQ8TC17 118 aaPredicted RBP18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 USP17L5A8MUK1 530 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 RTN2O75298 545 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 CNGA1P29973 690 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 TTMPQ5BVD1 217 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 CYFIP1Q7L576 1253 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 CD302Q8IX05 232 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 NAF1Q96HR8 494 aaKnown RBP18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 COL15A1P39059 1388 aa18.33■□□□□ 0.53
HMGXB3-201ENST00000502717 PPWD1Q96BP3 646 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 FOXP3Q9BZS1 431 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 PPCSQ9HAB8 311 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 C15orf41Q9Y2V0 281 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 PPEF1O14829 653 aaPredicted RBP18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 TRAPPC3O43617 180 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 CAND2O75155 1236 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 CTTNQ14247 550 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 KLHDC7AQ5VTJ3 777 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 DARS2Q6PI48 645 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 RGS9BPQ6ZS82 235 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 TMEM139Q8IV31 216 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 EIF1ADQ8N9N8 165 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 TTC13Q8NBP0 860 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 HIPK4Q8NE63 616 aa18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 GFM2Q969S9 779 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-201ENST00000502717 ATP11CQ8NB49 1132 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 PDP2Q9P2J9 529 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 ZBTB5O15062 677 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 DDR1Q08345 913 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 KIRREL3Q8IZU9 778 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 RIBC1Q8N443 379 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 XXYLT1Q8NBI6 393 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 ICA1LQ8NDH6 482 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 NAGPAQ9UK23 515 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 KRT38O76015 456 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 GSTA2P09210 222 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 DOK7Q18PE1 504 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 GADL1Q6ZQY3 521 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 ZNF662Q6ZS27 426 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 DTX3LQ8TDB6 740 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 ADAM22Q9P0K1 906 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 MMP10P09238 476 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 BMP6P22004 513 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 GCLMP48507 274 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 PHEXP78562 749 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 MAPK7Q13164 816 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 RASSF3Q86WH2 238 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 ZNF354CQ86Y25 554 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 TRIM56Q9BRZ2 755 aaKnown RBP18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 TLR10Q9BXR5 811 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 GOLPH3Q9H4A6 298 aa18.32■□□□□ 0.52
HMGXB3-201ENST00000502717 POTEFA5A3E0 1075 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 GPC4O75487 556 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SNUPNO95149 360 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 POTEIP0CG38 1075 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SLC9A1P19634 815 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SCNN1DP51172 638 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 DAB2IPQ5VWQ8 1189 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 POTEGQ6S5H5 508 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 ZBED8Q8IZ13 594 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 GINS2Q9Y248 185 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SPATA31A6Q5VVP1 1343 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 ATXN2Q99700 1313 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 UBOX5O94941 541 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 FAM153BP0C7A2 387 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 PDIA2Q13087 525 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 MED21Q13503 144 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 RPS6KA2Q15349 733 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 FAM153CQ494X1 144 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 RHOT1Q8IXI2 618 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 PIGOQ8TEQ8 1089 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SCYL1Q96KG9 808 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 KMT5AQ9NQR1 393 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 FAM153AQ9UHL3 310 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 TRAF3IP3Q9Y228 551 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 AMPD2Q01433 879 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 FSCBQ5H9T9 825 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 WWP1Q9H0M0 922 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 TTC7AQ9ULT0 858 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 A0A0U1RQJ8 604 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 CES2O00748 559 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 GIPC1O14908 333 aa18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SPOUT1Q5T280 376 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-201ENST00000502717 SLC26A4O43511 780 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 TNNC2P02585 160 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 PRDX5P30044 214 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 372.2 ms