RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.44
NR1H3-227ENST00000498548 NXF3Q9H4D5 531 aaKnown RBP17.83■□□□□ 0.44
NR1H3-227ENST00000498548 NGRNQ9NPE2 291 aaKnown RBP17.83■□□□□ 0.44
NR1H3-227ENST00000498548 KLK14Q9P0G3 267 aa17.83■□□□□ 0.44
NR1H3-227ENST00000498548 LAD1O00515 517 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 ALDH2P05091 517 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 EDN1P05305 212 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 MLH1P40692 756 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 PRPHP41219 470 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 ATP2C1P98194 919 aaPredicted RBP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 SMAD4Q13485 552 aaKnown RBP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 SMC1AQ14683 1233 aaKnown RBP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 PCBP1Q15365 356 aaKnown RBP eCLIP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 SMAD2Q15796 467 aaKnown RBP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 CDCA2Q69YH5 1023 aaPredicted RBP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 MRPL43Q8N983 215 aaKnown RBP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 DEPTORQ8TB45 409 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 CCDC51Q96ER9 411 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 ZFP42Q96MM3 310 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 VN1R3Q9BXE9 311 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 FZD8Q9H461 694 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 PRMT7Q9NVM4 692 aaPredicted RBP17.82■□□□□ 0.44
NR1H3-227ENST00000498548 DNM3Q9UQ16 869 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 FAM50BQ9Y247 325 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 FAN1Q9Y2M0 1017 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
NR1H3-227ENST00000498548 A0A1B0GUA9 196 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 VWA3AA6NCI4 1184 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 C2orf71A6NGG8 1288 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 ARL5CA6NH57 179 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 NRP1O14786 923 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 EYA4O95677 639 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 SCNN1GP51170 649 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 ZP2Q05996 745 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 CUL4AQ13619 759 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 TMEM132AQ24JP5 1023 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 SLC27A1Q6PCB7 646 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
NR1H3-227ENST00000498548 PNMA5Q96PV4 448 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 CDCA3Q99618 268 aaPredicted RBP17.81■□□□□ 0.44
NR1H3-227ENST00000498548 ZBP1Q9H171 429 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 UBN1Q9NPG3 1134 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 FOXD4L1Q9NU39 408 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 KANSL3Q9P2N6 904 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 PARP2Q9UGN5 583 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
NR1H3-227ENST00000498548 CLASP2O75122 1294 aaKnown RBP17.8■□□□□ 0.44
NR1H3-227ENST00000498548 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
NR1H3-227ENST00000498548 PRKCBP05771 671 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 NAMPTP43490 491 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 OR1G1P47890 313 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 COASYQ13057 564 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 KCNC3Q14003 757 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 ADHFE1Q8IWW8 467 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 COLGALT2Q8IYK4 626 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 SMRP1Q8NCR6 262 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 IFT74Q96LB3 600 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 CCDC113Q9H0I3 377 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 C2orf40Q9H1Z8 148 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 PRG3Q9Y2Y8 225 aaPredicted RBP17.8■□□□□ 0.44
NR1H3-227ENST00000498548 USP15Q9Y4E8 981 aaPredicted RBP17.8■□□□□ 0.44
NR1H3-227ENST00000498548 NCOR1O75376 2440 aa17.8■□□□□ 0.44
NR1H3-227ENST00000498548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.79■□□□□ 0.44
NR1H3-227ENST00000498548 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
NR1H3-227ENST00000498548 SFI1A8K8P3 1242 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 F8W810 466 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 HIP1RO75146 1068 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 CTSAP10619 480 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 PEX3P56589 373 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 PRPF4BQ13523 1007 aaKnown RBP17.79■□□□□ 0.44
NR1H3-227ENST00000498548 MAPK6Q16659 721 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 FAM187BQ17R55 369 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 EEF1DP3Q658K8 133 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 RINT1Q6NUQ1 792 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 ANKRD54Q6NXT1 300 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 RABGGTAQ92696 567 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 TMEM175Q9BSA9 504 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 RUSC1Q9BVN2 902 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 CXCL16Q9H2A7 254 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 PDZD7Q9H5P4 517 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 SNTG2Q9NY99 539 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 CACNG4Q9UBN1 327 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 PRKAG3Q9UGI9 489 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 GIT1Q9Y2X7 761 aa17.79■□□□□ 0.44
NR1H3-227ENST00000498548 FAM86C2PA6NEL3 165 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 C19orf67A6NJJ6 358 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 CCDC169A6NNP5 214 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 ACKR2O00590 384 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 RAD51AP2Q09MP3 1159 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 PPP2R5AQ15172 486 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 NT5DC1Q5TFE4 455 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 SYCE2Q6PIF2 218 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 TMEM184AQ6ZMB5 413 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 DAW1Q8N136 415 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 GSTCDQ8NEC7 633 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 KIFAP3Q92845 792 aa17.78■□□□□ 0.44
NR1H3-227ENST00000498548 PRIMPOLQ96LW4 560 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms