RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 GBP3Q9H0R5 595 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 PDZD7Q9H5P4 517 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 ANO10Q9NW15 660 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 NR2E3Q9Y5X4 410 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 SQORQ9Y6N5 450 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 CEP290O15078 2479 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 NLRC5Q86WI3 1866 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 TRIM49BA6NDI0 452 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 N4BP3O15049 544 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 PIGRP01833 764 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 AXLP30530 894 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 PAK1Q13153 545 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 PPIGQ13427 754 aaKnown RBP eCLIP14.86□□□□□ -0.033e-24■■□□□ 12.4
CPNE1-227ENST00000498056 GPNMBQ14956 572 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 NOLC1Q14978 699 aaKnown RBP eCLIP14.86□□□□□ -0.03
CPNE1-227ENST00000498056 KNOP1Q1ED39 458 aaKnown RBP14.86□□□□□ -0.03
CPNE1-227ENST00000498056 PLEKHG4Q58EX7 1191 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 CNKSR3Q6P9H4 555 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 MPZL3Q6UWV2 235 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 ZPBP2Q6X784 338 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
CPNE1-227ENST00000498056 ZBTB33Q86T24 672 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 ADSSL1Q8N142 457 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 DBF4BQ8NFT6 615 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 NOC3LQ8WTT2 800 aaKnown RBP14.86□□□□□ -0.03
CPNE1-227ENST00000498056 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 APBB2Q92870 758 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 KCNN1Q92952 543 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 TSG101Q99816 390 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 TCHPQ9BT92 498 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 TRIM6Q9C030 488 aaPredicted RBP14.86□□□□□ -0.03
CPNE1-227ENST00000498056 DNAJC25Q9H1X3 360 aa14.86□□□□□ -0.03
CPNE1-227ENST00000498056 TYW1Q9NV66 732 aaKnown RBP14.86□□□□□ -0.03
CPNE1-227ENST00000498056 ANKRD63C9JTQ0 380 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 MGEA5O60502 916 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 NPTXRO95502 500 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 CXCL10P02778 98 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 PFKMP08237 780 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 ACRP10323 421 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 ZSCAN20P17040 1043 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-227ENST00000498056 HOXD13P35453 343 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 STX17P56962 302 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 COBLL1Q53SF7 1204 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 EEF1DP3Q658K8 133 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 SLC39A4Q6P5W5 647 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 SLC27A1Q6PCB7 646 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 MLKLQ8NB16 471 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 POMGNT1Q8WZA1 660 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 P2RX5Q93086 422 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 ACO2Q99798 780 aaKnown RBP14.85□□□□□ -0.03
CPNE1-227ENST00000498056 TMX1Q9H3N1 280 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 AGPAT3Q9NRZ7 376 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 TNFSF13BQ9Y275 285 aa14.85□□□□□ -0.03
CPNE1-227ENST00000498056 PPP1R3GB7ZBB8 358 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 CLIC2O15247 247 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 CALUO43852 315 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-227ENST00000498056 TOM1L1O75674 476 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 CYP2J2P51589 502 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 TCTN1Q2MV58 587 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 DCAF4L1Q3SXM0 396 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 APBB1IPQ7Z5R6 666 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-227ENST00000498056 LINC01599Q8WXQ3 324 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 CCDC51Q96ER9 411 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 ZBTB45Q96K62 511 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-227ENST00000498056 ADAM2Q99965 735 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 CBWD1Q9BRT8 395 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 MSTO1Q9BUK6 570 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 APOL6Q9BWW8 343 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 FTHL17Q9BXU8 183 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 CDT1Q9H211 546 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 KCTD10Q9H3F6 313 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 SEMA6BQ9H3T3 888 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 IL23AQ9NPF7 189 aa14.84□□□□□ -0.03
CPNE1-227ENST00000498056 A0A1B0GUA9 196 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 BICDL2A1A5D9 508 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 CLDN3O15551 220 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 TGFB1I1O43294 461 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 ACTN1P12814 892 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 CCNE1P24864 410 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 HOXA11P31270 313 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-227ENST00000498056 PMS1P54277 932 aaKnown RBP14.83□□□□□ -0.04
CPNE1-227ENST00000498056 PSRC1Q6PGN9 363 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-227ENST00000498056 RPUSD2Q8IZ73 545 aaKnown RBP14.83□□□□□ -0.04
CPNE1-227ENST00000498056 CEP120Q8N960 986 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 RNF169Q8NCN4 708 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 GOLGA5Q8TBA6 731 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 SAAL1Q96ER3 474 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 DHTKD1Q96HY7 919 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-227ENST00000498056 FUCA2Q9BTY2 467 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 EIF2AQ9BY44 585 aaKnown RBP14.83□□□□□ -0.04
CPNE1-227ENST00000498056 NXF3Q9H4D5 531 aaKnown RBP14.83□□□□□ -0.04
CPNE1-227ENST00000498056 PCIF1Q9H4Z3 704 aa14.83□□□□□ -0.04
CPNE1-227ENST00000498056 TNRC18O15417 2968 aaPredicted RBP14.82□□□□□ -0.04
CPNE1-227ENST00000498056 ZBBXA8MT70 800 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 TULP1O00294 542 aaPredicted RBP14.82□□□□□ -0.04
CPNE1-227ENST00000498056 PDXKO00764 312 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 ABLIM1O14639 778 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 NR3C1P04150 777 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 MCF2P10911 925 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms