RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SORCS2Q96PQ0 1159 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 TRHDEQ9UKU6 1024 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 WASHC2CQ9Y4E1 1318 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 TRIM75PA6NK02 468 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 MUSKO15146 869 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 PHF2O75151 1096 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 KATNA1O75449 491 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 GYPEP15421 78 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 CTSSP25774 331 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 MTNR1BP49286 362 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 CCT2P78371 535 aaKnown RBP3.89□□□□□ -1.79
RIF1-212ENST00000498041 ADRM1Q16186 407 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 FKBP15Q5T1M5 1219 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 GJC2Q5T442 439 aaPredicted RBP3.89□□□□□ -1.79
RIF1-212ENST00000498041 MBNL2Q5VZF2 373 aaKnown RBP3.89□□□□□ -1.79
RIF1-212ENST00000498041 MFSD5Q6N075 450 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 PGM2L1Q6PCE3 622 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 FAM180AQ6UWF9 173 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 ABHD15Q6UXT9 468 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 SGMS1Q86VZ5 419 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 ANKRD35Q8N283 1001 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 CBARPQ8N350 705 aaPredicted RBP3.89□□□□□ -1.79
RIF1-212ENST00000498041 GLB1L3Q8NCI6 653 aaPredicted RBP3.89□□□□□ -1.79
RIF1-212ENST00000498041 OR5M3Q8NGP4 307 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 SSH1Q8WYL5 1049 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 MTMR8Q96EF0 704 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 ADOQ96SZ5 270 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 ACE2Q9BYF1 805 aaPredicted RBP3.89□□□□□ -1.79
RIF1-212ENST00000498041 ENKD1Q9H0I2 346 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 TLR9Q9NR96 1032 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 HOMER2Q9NSB8 354 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 ZBTB21Q9ULJ3 1066 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 SH3BP1Q9Y3L3 701 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 TSC22D4Q9Y3Q8 395 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 TESMINQ9Y4I5 508 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 GPR45Q9Y5Y3 372 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 UNC13AQ9UPW8 1703 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 RPTORQ8N122 1335 aa3.89□□□□□ -1.79
RIF1-212ENST00000498041 hCG_2014768A0A024R1R8 64 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 CYP27B1O15528 508 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 GASTP01350 101 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 SLPIP03973 132 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 MYBL2P10244 700 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 OSMP13725 252 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 AGXTP21549 392 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 CASRP41180 1078 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 IARSP41252 1262 aaKnown RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 ANAPC15P60006 121 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 KRTAP1-1Q07627 177 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 R3HDM1Q15032 1099 aaKnown RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 PRKD1Q15139 912 aaPredicted RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 CLUL1Q15846 466 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 MUM1L1Q5H9M0 696 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 ZNF808Q8N4W9 903 aaPredicted RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 C1orf162Q8NEQ5 155 aaPredicted RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 GPR156Q8NFN8 814 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 RIN2Q8WYP3 895 aaPredicted RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 IL17RAQ96F46 866 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 FAXDC2Q96IV6 333 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 ZNF512Q96ME7 567 aaPredicted RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 CCDC8Q9H0W5 538 aaPredicted RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 GREM2Q9H772 168 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 ZNF277Q9NRM2 450 aaPredicted RBP3.88□□□□□ -1.79
RIF1-212ENST00000498041 MKS1Q9NXB0 559 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 SCOCQ9UIL1 159 aa3.88□□□□□ -1.79
RIF1-212ENST00000498041 SHTN1A0MZ66 631 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 CAPN14A8MX76 684 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 C1QTNF3-AMACRE9PGA6 284 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 GABRDO14764 452 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 HOXA3O43365 443 aaPredicted RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 AKR1B10O60218 316 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 MFAP3LO75121 409 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 MT-CO1P00395 513 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 RBP3P10745 1247 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 TACR2P21452 398 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 HIBADHP31937 336 aaKnown RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 GZMKP49863 264 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 IGBP1P78318 339 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 MALLQ13021 153 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 MRPL49Q13405 166 aaKnown RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 CDSNQ15517 529 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 ELAVL1Q15717 326 aaKnown RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 ABCB5Q2M3G0 1257 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 CRB2Q5IJ48 1285 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 SPTY2D1Q68D10 685 aaPredicted RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 APBB1IPQ7Z5R6 666 aaPredicted RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 PALM2Q8IXS6 379 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 GSPT2Q8IYD1 628 aaKnown RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 THEMISQ8N1K5 641 aaPredicted RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 ZNF480Q8WV37 535 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 MIEF2Q96C03 454 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 FUBP3Q96I24 572 aaKnown RBP eCLIP3.87□□□□□ -1.79
RIF1-212ENST00000498041 CDC5LQ99459 802 aaKnown RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 ADI1Q9BV57 179 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 EPC1Q9H2F5 836 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 RBM12Q9NTZ6 932 aaKnown RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 GPRC5DQ9NZD1 345 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 HECAQ9UBI9 543 aaPredicted RBP3.87□□□□□ -1.79
RIF1-212ENST00000498041 SPEF1Q9Y4P9 236 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms