RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SLC44A2Q8IWA5 706 aaPredicted RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SPERTQ8NA61 448 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 OR8H1Q8NGG4 311 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 PARD3BQ8TEW8 1205 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 GCC1Q96CN9 775 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 TRMT2BQ96GJ1 504 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 RBM18Q96H35 190 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 DSCC1Q9BVC3 393 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 HERC2P3Q9BVR0 1158 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MRPL9Q9BYD2 267 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 PANK3Q9H999 370 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SP110Q9HB58 689 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MKNK2Q9HBH9 465 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CHST7Q9NS84 486 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ERVK13-1Q9NX77 482 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SIRPGQ9P1W8 387 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 HERC5Q9UII4 1024 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CCPG1Q9ULG6 757 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 FAM50BQ9Y247 325 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 NDUFAB1O14561 156 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ABLIM1O14639 778 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 TOR1BO14657 336 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 RTN2O75298 545 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 TADA3O75528 432 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 GIPRP48546 466 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 GUCY2FP51841 1108 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 PLIN5Q00G26 463 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 LRRC74AQ0VAA2 488 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 G3BP1Q13283 466 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ANKRD1Q15327 319 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MLANAQ16655 118 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MPZL3Q6UWV2 235 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 BTNL9Q6UXG8 535 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 RAPH1Q70E73 1250 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 INTS8Q75QN2 995 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 TMC6Q7Z403 805 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SLC51AQ86UW1 340 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CPNE8Q86YQ8 564 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 RAB11FIP4Q86YS3 637 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MFN1Q8IWA4 741 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CARNMT1Q8N4J0 409 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CCDC110Q8TBZ0 833 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MGARPQ8TDB4 240 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ARHGAP45Q92619 1136 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 DDX11Q96FC9 970 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 HHIPL1Q96JK4 782 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 FCRL3Q96P31 734 aaPredicted RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 HERPUD2Q9BSE4 406 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 STK31Q9BXU1 1019 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 GP6Q9HCN6 339 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SEPT11Q9NVA2 429 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 BTG4Q9NY30 223 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 PFDN2Q9UHV9 154 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 GPR160Q9UJ42 338 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 PNMA8BQ9ULN7 279 aaPredicted RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 AFG3L2Q9Y4W6 797 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 PCDHB12Q9Y5F1 795 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 IBTKQ9P2D0 1353 aaPredicted RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SYNJ2O15056 1496 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 GAKO14976 1311 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ROCK1Q13464 1354 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 ARPC4-TTLL3A0A0A6YYG9 625 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 TMEM221A6NGB7 291 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 LRRC72A6NJI9 287 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 VSTM5A8MXK1 200 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 ALG1L2C9J202 215 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 LSM1O15116 133 aaKnown RBP3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 DDAH1O94760 285 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 S100A6P06703 90 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 SLC5A1P13866 664 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 ALOX15P16050 662 aaPredicted RBP3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 PRLRP16471 622 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 MCM3P25205 808 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 SERPINB3P29508 390 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 PRKAR2BP31323 418 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 CTNNA1P35221 906 aaKnown RBP3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 ATP6V1E1P36543 226 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 MTHFRP42898 656 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 MRPL12P52815 198 aaKnown RBP3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 CUL4BQ13620 913 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 SEMA3AQ14563 771 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 TTC39AQ5SRH9 613 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF804AQ7Z570 1209 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 DGKHQ86XP1 1220 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 AGBL5Q8NDL9 886 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 CTCFLQ8NI51 663 aaPredicted RBP3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 RASGRP4Q8TDF6 673 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 PPP1R14BQ96C90 147 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 SAAL1Q96ER3 474 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 MAML3Q96JK9 1138 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 CEP295NLQ96MC4 621 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 TSGA13Q96PP4 275 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 CTAGE1Q96RT6 745 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 TTPALQ9BTX7 342 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 VCPKMTQ9H867 229 aa3.4□□□□□ -1.86
SNRNP48-202ENST00000496946 GPR108Q9NPR9 543 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms