RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 HOXA3O43365 443 aaPredicted RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 CFBP00751 764 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 NCLP19338 710 aaKnown RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 ACRV1P26436 265 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 MTNR1BP49286 362 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 PUM1Q14671 1186 aaKnown RBP eCLIP6.6□□□□□ -1.35
SNX13-211ENST00000496855 ANO4Q32M45 955 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 INAVAQ3KP66 663 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 THEMISQ8N1K5 641 aaPredicted RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 ZCRB1Q8TBF4 217 aaKnown RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 ACE2Q9BYF1 805 aaPredicted RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 TRIM75PA6NK02 468 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 ALG1L2C9J202 215 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 SLC5A3P53794 718 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 MRPL49Q13405 166 aaKnown RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 MTMR1Q13613 665 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 FAM214AQ32MH5 1076 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 USP39Q53GS9 565 aaKnown RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 ELOA2Q8IYF1 753 aaPredicted RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 CBARPQ8N350 705 aaPredicted RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 LILRA3Q8N6C8 439 aaPredicted RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 RIN2Q8WYP3 895 aaPredicted RBP6.6□□□□□ -1.35
SNX13-211ENST00000496855 EXTL1Q92935 676 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 IL17RAQ96F46 866 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 SCOCQ9UIL1 159 aa6.6□□□□□ -1.35
SNX13-211ENST00000496855 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 PLSCR1O15162 318 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 MATN3O15232 486 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 MFAP3LO75121 409 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 PHF2O75151 1096 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 ITGA10O75578 1167 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 IPO13O94829 963 aaKnown RBP6.59□□□□□ -1.36
SNX13-211ENST00000496855 OSMP13725 252 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 GNAT2P19087 354 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 GZMKP49863 264 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 EVA1CP58658 441 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 FAM50AQ14320 339 aaKnown RBP6.59□□□□□ -1.36
SNX13-211ENST00000496855 PTPROQ16827 1216 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 MUM1L1Q5H9M0 696 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 SYDE2Q5VT97 1194 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 APBB1IPQ7Z5R6 666 aaPredicted RBP6.59□□□□□ -1.36
SNX13-211ENST00000496855 AMOTL1Q8IY63 956 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 GSPT2Q8IYD1 628 aaKnown RBP6.59□□□□□ -1.36
SNX13-211ENST00000496855 GPR156Q8NFN8 814 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 MDGA1Q8NFP4 955 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 ZNF480Q8WV37 535 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 EPC1Q9H2F5 836 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 GREM2Q9H772 168 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 GPRC5DQ9NZD1 345 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 TRHDEQ9UKU6 1024 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 GPR45Q9Y5Y3 372 aa6.59□□□□□ -1.36
SNX13-211ENST00000496855 AKR1B10O60218 316 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 KATNA1O75449 491 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 GASTP01350 101 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 TNFRSF1AP19438 455 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 AGXTP21549 392 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 IARSP41252 1262 aaKnown RBP6.58□□□□□ -1.36
SNX13-211ENST00000496855 ITKQ08881 620 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 RRP1BQ14684 758 aaKnown RBP6.58□□□□□ -1.36
SNX13-211ENST00000496855 MST1LQ2TV78 715 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 NRN1LQ496H8 165 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 MBNL2Q5VZF2 373 aaKnown RBP6.58□□□□□ -1.36
SNX13-211ENST00000496855 RNF207Q6ZRF8 634 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 Q6ZRM9 215 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 ST8SIA2Q92186 375 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 GPATCH3Q96I76 525 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 CDC5LQ99459 802 aaKnown RBP6.58□□□□□ -1.36
SNX13-211ENST00000496855 BRINP2Q9C0B6 783 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 ZNF277Q9NRM2 450 aaPredicted RBP6.58□□□□□ -1.36
SNX13-211ENST00000496855 AURKAIP1Q9NWT8 199 aaPredicted RBP6.58□□□□□ -1.36
SNX13-211ENST00000496855 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
SNX13-211ENST00000496855 CRHR1P34998 444 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 SCNN1GP51170 649 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 RABGGTBP53611 331 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 APBA1Q02410 837 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 MALLQ13021 153 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 CRHR2Q13324 411 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 GJC2Q5T442 439 aaPredicted RBP6.57□□□□□ -1.36
SNX13-211ENST00000496855 LCE5AQ5TCM9 118 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 PGM2L1Q6PCE3 622 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 FAM180AQ6UWF9 173 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 CERS3Q8IU89 383 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 C1orf210Q8IVY1 113 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 MB21D1Q8N884 522 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 C1orf162Q8NEQ5 155 aaPredicted RBP6.57□□□□□ -1.36
SNX13-211ENST00000496855 IL17DQ8TAD2 202 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 MTMR8Q96EF0 704 aa6.57□□□□□ -1.36
SNX13-211ENST00000496855 CCDC8Q9H0W5 538 aaPredicted RBP6.57□□□□□ -1.36
SNX13-211ENST00000496855 RBM12Q9NTZ6 932 aaKnown RBP6.57□□□□□ -1.36
SNX13-211ENST00000496855 ADSLP30566 484 aaPredicted RBP6.56□□□□□ -1.36
SNX13-211ENST00000496855 MAN2A2P49641 1150 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 PPP3CAQ08209 521 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 CLUL1Q15846 466 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 ATXN2LQ8WWM7 1075 aaKnown RBP6.56□□□□□ -1.36
SNX13-211ENST00000496855 SSH1Q8WYL5 1049 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 SLC2A13Q96QE2 648 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 CPPED1Q9BRF8 314 aaPredicted RBP6.56□□□□□ -1.36
SNX13-211ENST00000496855 PDCD2LQ9BRP1 358 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 GPR87Q9BY21 358 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 DMRT3Q9NQL9 472 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms