RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 IFT74Q96LB3 600 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 FBXL18Q96ME1 805 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 OSGEPQ9NPF4 335 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 GDF3Q9NR23 364 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 ADAM21Q9UKJ8 722 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 AMFRQ9UKV5 643 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 NOC2LQ9Y3T9 749 aaKnown RBP14.11□□□□□ -0.15
GARNL3-220ENST00000496711 TELO2Q9Y4R8 837 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 SNCAIPQ9Y6H5 919 aa14.11□□□□□ -0.15
GARNL3-220ENST00000496711 HNRNPDLO14979 420 aaKnown RBP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 BUB1BO60566 1050 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 USP2O75604 605 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 ICAM3P32942 547 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 GYS2P54840 703 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 PPATQ06203 517 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 VGLL4Q14135 290 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 STXBP2Q15833 593 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 XKR3Q5GH77 459 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 POMGNT1Q8WZA1 660 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 CCDC127Q96BQ5 260 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 THAP2Q9H0W7 228 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 POLR3FQ9H1D9 316 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 PSD3Q9NYI0 1048 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 TAS2R14Q9NYV8 317 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 COQ4Q9Y3A0 265 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 SORBS3O60504 671 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 SYF2O95926 243 aaKnown RBP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 GLI1P08151 1106 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 GARTP22102 1010 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 GTF2H1P32780 548 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 MFAP3P55082 362 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 ENPEPQ07075 957 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 CYP24A1Q07973 514 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 PAK2Q13177 524 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 NNTQ13423 1086 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 EMC2Q15006 297 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 MTERF2Q49AM1 385 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 BRDTQ58F21 947 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-220ENST00000496711 RHOT2Q8IXI1 618 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 ANKRD35Q8N283 1001 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 GPD1LQ8N335 351 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 PPM1KQ8N3J5 372 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 RASGEF1CQ8N431 466 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 SCFD2Q8WU76 684 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 KAT5Q92993 513 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 ZBTB9Q96C00 473 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 ARHGEF26Q96DR7 871 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 MFSD14AQ96MC6 490 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 ARHGAP28Q9P2N2 729 aa14.1□□□□□ -0.15
GARNL3-220ENST00000496711 GOLGA6BA6NDN3 693 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 RNF40O75150 1001 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 USP8P40818 1118 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 GPC3P51654 580 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 HADHBP55084 474 aaKnown RBP14.09□□□□□ -0.15
GARNL3-220ENST00000496711 GUCY2DQ02846 1103 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 TREML2Q5T2D2 321 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.09□□□□□ -0.15
GARNL3-220ENST00000496711 KLHL7Q8IXQ5 586 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 FAM71AQ8IYT1 594 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 RPUSD2Q8IZ73 545 aaKnown RBP14.09□□□□□ -0.15
GARNL3-220ENST00000496711 EPS8L1Q8TE68 723 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 SHC3Q92529 594 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 SEMA4DQ92854 862 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 BICD1Q96G01 975 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 KREMEN1Q96MU8 473 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 NT5C1BQ96P26 610 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 EPB41L5Q9HCM4 733 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 ZNF302Q9NR11 478 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 FBXO40Q9UH90 709 aa14.09□□□□□ -0.15
GARNL3-220ENST00000496711 NOCTQ9UK39 431 aaKnown RBP14.09□□□□□ -0.15
GARNL3-220ENST00000496711 CCDC188H7C350 402 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 RAD51CO43502 376 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 PHACTR2O75167 634 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 OATP04181 439 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 GGCXP38435 758 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-220ENST00000496711 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-220ENST00000496711 SP2Q02086 613 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 LBX2Q6XYB7 198 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 TAS1R3Q7RTX0 852 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 FBXL13Q8NEE6 735 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 TOPORSQ9NS56 1045 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-220ENST00000496711 KCNG1Q9UIX4 513 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 ZHX1Q9UKY1 873 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-220ENST00000496711 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-220ENST00000496711 SYNGAP1Q96PV0 1343 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 ZSCAN5CA6NGD5 496 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-220ENST00000496711 ATG7O95352 703 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 CNTN2Q02246 1040 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 TCEAL1Q15170 157 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 NOP9Q86U38 636 aaKnown RBP14.08□□□□□ -0.16
GARNL3-220ENST00000496711 RIOX2Q8IUF8 465 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 NFU1Q9UMS0 254 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 COG5Q9UP83 839 aa14.08□□□□□ -0.16
GARNL3-220ENST00000496711 DIS3Q9Y2L1 958 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms