RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 BICDL2A1A5D9 508 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 EIF3FO00303 357 aaPredicted RBP6.72□□□□□ -1.33
SSBP1-213ENST00000496622 GAS7O60861 476 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 PSMD10O75832 226 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 FOSP01100 380 aaPredicted RBP6.72□□□□□ -1.33
SSBP1-213ENST00000496622 KRT18P05783 430 aaKnown RBP6.72□□□□□ -1.33
SSBP1-213ENST00000496622 SKIP12755 728 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 ATICP31939 592 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 CASP14P31944 242 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 COASYQ13057 564 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 ITGB3BPQ13352 177 aaPredicted RBP6.72□□□□□ -1.33
SSBP1-213ENST00000496622 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
SSBP1-213ENST00000496622 SPECC1LQ69YQ0 1117 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 EEPD1Q7L9B9 569 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 TC2NQ8N9U0 490 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 BHMTQ93088 406 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 NACC2Q96BF6 587 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 DCPSQ96C86 337 aaKnown RBP6.72□□□□□ -1.33
SSBP1-213ENST00000496622 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 RRAGCQ9HB90 399 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 ST7Q9NRC1 585 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 PANK4Q9NVE7 773 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 RMND1Q9NWS8 449 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 ZNF214Q9UL59 606 aaPredicted RBP6.72□□□□□ -1.33
SSBP1-213ENST00000496622 SNCAIPQ9Y6H5 919 aa6.72□□□□□ -1.33
SSBP1-213ENST00000496622 DYTNA2CJ06 578 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 CARNS1A5YM72 827 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 SOWAHDA6NJG2 315 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 RASSF10A6NK89 507 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 PSMA7O14818 248 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 LGR5O75473 907 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 ABL1P00519 1130 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 HOXD10P28358 340 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 CIITAP33076 1130 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 SLC12A3P55017 1021 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 AMPD3Q01432 767 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 CNTN2Q02246 1040 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 UBXN1Q04323 297 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 Q4G0T1 1027 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 AGAP9Q5VTM2 703 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 PACS1Q6VY07 963 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 RNF207Q6ZRF8 634 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 UBE2Q1Q7Z7E8 422 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 APOBEC3FQ8IUX4 373 aaKnown RBP6.71□□□□□ -1.33
SSBP1-213ENST00000496622 SLFN12Q8IYM2 578 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 TXLNBQ8N3L3 684 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 GABPB2Q8TAK5 448 aaPredicted RBP6.71□□□□□ -1.33
SSBP1-213ENST00000496622 REEP2Q9BRK0 252 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 TACO1Q9BSH4 297 aaKnown RBP6.71□□□□□ -1.33
SSBP1-213ENST00000496622 CD248Q9HCU0 757 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 ADARB2Q9NS39 739 aaKnown RBP6.71□□□□□ -1.33
SSBP1-213ENST00000496622 RNF146Q9NTX7 359 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 ZNF112Q9UJU3 913 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 TFR2Q9UP52 801 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 AFG3L2Q9Y4W6 797 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 SCN4AP35499 1836 aa6.71□□□□□ -1.33
SSBP1-213ENST00000496622 MAN1A2O60476 641 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 PRPF6O94906 941 aaKnown RBP6.71□□□□□ -1.34
SSBP1-213ENST00000496622 GYPCP04921 128 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 ADH1AP07327 375 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 RPA1P27694 616 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 KCNB1Q14721 858 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 COG2Q14746 738 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 COL19A1Q14993 1142 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 ZC2HC1CQ53FD0 456 aaPredicted RBP6.71□□□□□ -1.34
SSBP1-213ENST00000496622 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 TOGARAM2Q6ZUX3 1019 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 UNC13DQ70J99 1090 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 OTUD6AQ7L8S5 288 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 PRICKLE2Q7Z3G6 844 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 SPATA21Q7Z572 469 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 P2RX5Q93086 422 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 RMDN2Q96LZ7 410 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 SCLT1Q96NL6 688 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 HSD17B14Q9BPX1 270 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 PYM1Q9BRP8 204 aaKnown RBP6.71□□□□□ -1.34
SSBP1-213ENST00000496622 SLC39A3Q9BRY0 314 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 GLT8D2Q9H1C3 349 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 POLMQ9NP87 494 aaPredicted RBP6.71□□□□□ -1.34
SSBP1-213ENST00000496622 AGPAT5Q9NUQ2 364 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 STK17AQ9UEE5 414 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 DNM3Q9UQ16 869 aa6.71□□□□□ -1.34
SSBP1-213ENST00000496622 POLR2AP24928 1970 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 MEN1O00255 615 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 EPHB6O15197 1021 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 EIF4BP23588 611 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 ELF1P32519 619 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 RANBP1P43487 201 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 RAB27AP51159 221 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 HSD17B4P51659 736 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 COPB1P53618 953 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 MTMR1Q13613 665 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 GIT2Q14161 759 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 NAA30Q147X3 362 aaPredicted RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 PGM5Q15124 567 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 SUPT20HL1Q3ZLR7 823 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 GJC2Q5T442 439 aaPredicted RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 GADL1Q6ZQY3 521 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 SFR1Q86XK3 245 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms