RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 RCCD1A6NED2 376 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 PRPF3O43395 683 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 MCF2P10911 925 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 GPSM2P81274 684 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 HIC1Q14526 733 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 NR1D2Q14995 579 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 LONRF1Q17RB8 773 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 TNNI3KQ59H18 835 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 FRA10AC1Q70Z53 315 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 TBC1D16Q8TBP0 767 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 DIS3LQ8TF46 1054 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ESR2Q92731 530 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ATP2A3Q93084 1043 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 BORCS5Q969J3 196 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 HNRNPABQ99729 332 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 DHX36Q9H2U1 1008 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 CAAP1Q9H8G2 361 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ADAMTS1Q9UHI8 967 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 LNPEPQ9UIQ6 1025 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 FPGT-TNNI3KV9GXZ4 949 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 C3P01024 1663 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 DDX3XO00571 662 aaKnown RBP eCLIP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 SLC26A4O43511 780 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 CDH16O75309 829 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ACVR2BQ13705 512 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 PDK3Q15120 406 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 NAB2Q15742 525 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 CWF19L2Q2TBE0 894 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 KHDC1Q4VXA5 237 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 FIGNQ5HY92 759 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 KAZNQ674X7 775 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 TERB1Q8NA31 727 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 HELBQ8NG08 1087 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ACTRT1Q8TDG2 376 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 NSMCE3Q96MG7 304 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 PRPF18Q99633 342 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 OSBPL8Q9BZF1 889 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 EDEM3Q9BZQ6 932 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 CNNM2Q9H8M5 875 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 NPHS2Q9NP85 383 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 PIH1D3Q9NQM4 214 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 CHPF2Q9P2E5 772 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 CES2O00748 559 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 KRT6CP48668 564 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 USP11P51784 963 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 ARHGAP4P98171 946 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 STOX1Q6ZVD7 989 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 PURBQ96QR8 312 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 MRPS26Q9BYN8 205 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-205ENST00000496549 MROH7Q68CQ1 1323 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 B2RBV5 119 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 EIF3FO00303 357 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 LTKP29376 864 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 NR1H2P55055 460 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 GSTM4Q03013 218 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 PPP2R5CQ13362 524 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 CLPPQ16740 277 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 GALNTL6Q49A17 601 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 TTC39CQ8N584 583 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 HIPK4Q8NE63 616 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 ANKS1AQ92625 1134 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 THTPAQ9BU02 230 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 CEP44Q9C0F1 390 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 RBMX2Q9Y388 322 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 DTNAQ9Y4J8 743 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 N6AMT1Q9Y5N5 214 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 RFX7Q2KHR2 1363 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 SALL1Q9NSC2 1324 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 SFI1A8K8P3 1242 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 TRAF5O00463 557 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 PHF2O75151 1096 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 EYA4O95677 639 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 KRT8P05787 483 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 CYP2C9P11712 490 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 MRPS15P82914 257 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 MDM2Q00987 491 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 LRRC63Q05C16 580 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 TUBA3EQ6PEY2 450 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 WAPLQ7Z5K2 1190 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 EXOC3L1Q86VI1 746 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 MRRFQ96E11 262 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 OTUD5Q96G74 571 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 TRIM56Q9BRZ2 755 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 RPAP3Q9H6T3 665 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 UVRAGQ9P2Y5 699 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 NDUFB9Q9Y6M9 179 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 SLC4A4Q9Y6R1 1079 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 NPATQ14207 1427 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 TBKBP1A7MCY6 615 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 PLEKP08567 350 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 ANPEPP15144 967 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 CHRNA3P32297 505 aa8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 YARSP54577 528 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 BTG3Q14201 252 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 UAP1Q16222 522 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-205ENST00000496549 MEI1Q5TIA1 1274 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms