RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 SLC37A4O43826 429 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 SRGAP2CP0DJJ0 459 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 AXLP30530 894 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 TECP42680 631 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 ADKP55263 362 aaKnown RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 FILIP1LQ4L180 1135 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 KIF18AQ8NI77 898 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 TSC1Q92574 1164 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 NECTIN4Q96NY8 510 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 TOPORSQ9NS56 1045 aaPredicted RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 PCDHA12Q9UN75 941 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 GDAQ9Y2T3 454 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 KDM3AQ9Y4C1 1321 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 TADA2AO75478 443 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 FECHP22830 423 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 EDNRBP24530 442 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 GBP2P32456 591 aaPredicted RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 NLRP11P59045 1033 aaKnown RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 ELAVL2Q12926 359 aaKnown RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 PCBP1Q15365 356 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 SRGAP1Q7Z6B7 1085 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 MMTAG2Q9BU76 263 aaKnown RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 CCDC94Q9BW85 323 aaPredicted RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 NGRNQ9NPE2 291 aaKnown RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 DNM3Q9UQ16 869 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 CD52P31358 61 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 SREBF1P36956 1147 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 MTHFRP42898 656 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 PRKCEQ02156 737 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 SLC24A5Q71RS6 500 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 RNPEPQ9H4A4 650 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 FAN1Q9Y2M0 1017 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 LRRC10BA6NIK2 292 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 MFAP3LO75121 409 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 XYLBO75191 536 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 ALDH2P05091 517 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 UBA7P41226 1012 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 COPB1P53618 953 aaKnown RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 GRB10Q13322 594 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 KYAT1Q16773 422 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 NOTUMQ6P988 496 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 GDPD5Q8WTR4 605 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 GTPBP4Q9BZE4 634 aaKnown RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.31□□□□□ -0.927e-7■■□□□ 13.2
VPS13B-206ENST00000496144 TREHO43280 583 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 CD4P01730 458 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 SPAG1Q07617 926 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 DMP1Q13316 513 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 TRIM65Q6PJ69 517 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 ATF7P17544 494 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 TXKP42681 527 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 TRIM14Q14142 442 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 TMEM119Q4V9L6 283 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 PLCD3Q8N3E9 789 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 TDRD5Q8NAT2 981 aaKnown RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 CCDC51Q96ER9 411 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 INPP4AQ96PE3 977 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 PLIN2Q99541 437 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 UBE2ZQ9H832 354 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 MRPL17Q9NRX2 175 aaKnown RBP9.31□□□□□ -0.92
VPS13B-206ENST00000496144 POLIQ9UNA4 740 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 UBIAD1Q9Y5Z9 338 aa9.31□□□□□ -0.92
VPS13B-206ENST00000496144 GOLGA6L9A6NEM1 432 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 SYT10Q6XYQ8 523 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 LMBR1Q8WVP7 490 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 MRPL38Q96DV4 380 aaKnown RBP9.3□□□□□ -0.92
VPS13B-206ENST00000496144 ASB2Q96Q27 587 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 ADGRA3Q8IWK6 1321 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 H7C4K7 107 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 GJB5O95377 273 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 PMS1P54277 932 aaKnown RBP9.3□□□□□ -0.92
VPS13B-206ENST00000496144 RPAINQ86UA6 219 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 SYCP3Q8IZU3 236 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 TBC1D5Q92609 795 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 DHTKD1Q96HY7 919 aaPredicted RBP9.3□□□□□ -0.92
VPS13B-206ENST00000496144 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.3□□□□□ -0.92
VPS13B-206ENST00000496144 PLPP4Q5VZY2 271 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 LLGL2Q6P1M3 1020 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 CNNM4Q6P4Q7 775 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 SERINC5Q86VE9 423 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 L2HGDHQ9H9P8 463 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 TRIM49BA6NDI0 452 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 SLC26A4O43511 780 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 ZC3H11AO75152 810 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS13B-206ENST00000496144 TDP2O95551 362 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 BMPR1AP36894 532 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 AMPD3Q01432 767 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 PDIA5Q14554 519 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 EPHA7Q15375 998 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 RAD54LQ92698 747 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 EXOC1Q9NV70 894 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 PLXNB2O15031 1838 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 GYPCP04921 128 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 PPP1R2P41236 205 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 STIM1Q13586 685 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 PLCB4Q15147 1175 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms