RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 CXCL10P02778 98 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 ERCC5P28715 1186 aaPredicted RBP21.33■■□□□ 1.01
ATG3-208ENST00000495756 AXLP30530 894 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 SNRPFP62306 86 aaKnown RBP21.33■■□□□ 1.01
ATG3-208ENST00000495756 TMEM132AQ24JP5 1023 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 ZCWPW2Q504Y3 356 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 GOLGA5Q8TBA6 731 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 DPF3Q92784 378 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 AGPAT3Q9NRZ7 376 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 TRAF3IP3Q9Y228 551 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 PIN4Q9Y237 131 aaKnown RBP21.33■■□□□ 1.01
ATG3-208ENST00000495756 TNFSF13BQ9Y275 285 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 PMS1P54277 932 aaKnown RBP21.32■■□□□ 1
ATG3-208ENST00000495756 PLEKHG4Q58EX7 1191 aa21.32■■□□□ 1
ATG3-208ENST00000495756 NOTUMQ6P988 496 aa21.32■■□□□ 1
ATG3-208ENST00000495756 NAT10Q9H0A0 1025 aaKnown RBP21.32■■□□□ 1
ATG3-208ENST00000495756 TMX1Q9H3N1 280 aa21.32■■□□□ 1
ATG3-208ENST00000495756 PDZD7Q9H5P4 517 aa21.32■■□□□ 1
ATG3-208ENST00000495756 PTPRHQ9HD43 1115 aa21.32■■□□□ 1
ATG3-208ENST00000495756 CHST12Q9NRB3 414 aa21.32■■□□□ 1
ATG3-208ENST00000495756 CGNQ9P2M7 1197 aaKnown RBP21.32■■□□□ 1
ATG3-208ENST00000495756 RWDD2AQ9UIY3 292 aa21.32■■□□□ 1
ATG3-208ENST00000495756 STYXL1Q9Y6J8 313 aa21.32■■□□□ 1
ATG3-208ENST00000495756 TRIM49BA6NDI0 452 aa21.32■■□□□ 1
ATG3-208ENST00000495756 PROZP22891 400 aa21.32■■□□□ 1
ATG3-208ENST00000495756 ADSSP30520 456 aa21.32■■□□□ 1
ATG3-208ENST00000495756 STX17P56962 302 aa21.32■■□□□ 1
ATG3-208ENST00000495756 LRRC63Q05C16 580 aa21.32■■□□□ 1
ATG3-208ENST00000495756 EEF1DP3Q658K8 133 aa21.32■■□□□ 1
ATG3-208ENST00000495756 ANKRD40Q6AI12 368 aa21.32■■□□□ 1
ATG3-208ENST00000495756 CDR2LQ86X02 465 aaPredicted RBP21.32■■□□□ 1
ATG3-208ENST00000495756 TMEM199Q8N511 208 aa21.32■■□□□ 1
ATG3-208ENST00000495756 TET1Q8NFU7 2136 aa21.32■■□□□ 1
ATG3-208ENST00000495756 ZBTB45Q96K62 511 aaPredicted RBP21.32■■□□□ 1
ATG3-208ENST00000495756 MED15Q96RN5 788 aa21.32■■□□□ 1
ATG3-208ENST00000495756 TSG101Q99816 390 aa21.32■■□□□ 1
ATG3-208ENST00000495756 ANKFY1Q9P2R3 1169 aa21.32■■□□□ 1
ATG3-208ENST00000495756 BICDL2A1A5D9 508 aa21.31■■□□□ 1
ATG3-208ENST00000495756 ABLIM1O14639 778 aa21.31■■□□□ 1
ATG3-208ENST00000495756 N4BP3O15049 544 aa21.31■■□□□ 1
ATG3-208ENST00000495756 CLDN3O15551 220 aa21.31■■□□□ 1
ATG3-208ENST00000495756 CALUO43852 315 aaPredicted RBP21.31■■□□□ 1
ATG3-208ENST00000495756 CSF2RAP15509 400 aa21.31■■□□□ 1
ATG3-208ENST00000495756 SLFN12LQ6IEE8 588 aa21.31■■□□□ 1
ATG3-208ENST00000495756 TTI2Q6NXR4 508 aa21.31■■□□□ 1
ATG3-208ENST00000495756 FOXR2Q6PJQ5 311 aa21.31■■□□□ 1
ATG3-208ENST00000495756 MPZL3Q6UWV2 235 aa21.31■■□□□ 1
ATG3-208ENST00000495756 DEFB128Q7Z7B8 93 aa21.31■■□□□ 1
ATG3-208ENST00000495756 DBF4BQ8NFT6 615 aa21.31■■□□□ 1
ATG3-208ENST00000495756 SEPT8Q92599 483 aa21.31■■□□□ 1
ATG3-208ENST00000495756 CCDC51Q96ER9 411 aa21.31■■□□□ 1
ATG3-208ENST00000495756 TCHPQ9BT92 498 aa21.31■■□□□ 1
ATG3-208ENST00000495756 TSPY26PQ9H489 355 aa21.31■■□□□ 1
ATG3-208ENST00000495756 PCDH10Q9P2E7 1040 aa21.31■■□□□ 1
ATG3-208ENST00000495756 A0A0B4J269 797 aa21.3■■□□□ 1
ATG3-208ENST00000495756 CLIC2O15247 247 aa21.3■■□□□ 1
ATG3-208ENST00000495756 ZSCAN20P17040 1043 aaPredicted RBP21.3■■□□□ 1
ATG3-208ENST00000495756 GARTP22102 1010 aa21.3■■□□□ 1
ATG3-208ENST00000495756 DSC3Q14574 896 aa21.3■■□□□ 1
ATG3-208ENST00000495756 EDRF1Q3B7T1 1238 aa21.3■■□□□ 1
ATG3-208ENST00000495756 ZNF568Q3ZCX4 644 aa21.3■■□□□ 1
ATG3-208ENST00000495756 SLC27A1Q6PCB7 646 aa21.3■■□□□ 1
ATG3-208ENST00000495756 C12orf56Q8IXR9 622 aa21.3■■□□□ 1
ATG3-208ENST00000495756 POMGNT1Q8WZA1 660 aa21.3■■□□□ 1
ATG3-208ENST00000495756 VWCEQ96DN2 955 aa21.3■■□□□ 1
ATG3-208ENST00000495756 CBWD1Q9BRT8 395 aa21.3■■□□□ 1
ATG3-208ENST00000495756 HAPLN2Q9GZV7 340 aa21.3■■□□□ 1
ATG3-208ENST00000495756 CAVIN2O95810 425 aa21.29■■□□□ 1
ATG3-208ENST00000495756 NR3C1P04150 777 aa21.29■■□□□ 1
ATG3-208ENST00000495756 SYN1P17600 705 aa21.29■■□□□ 1
ATG3-208ENST00000495756 MATR3P43243 847 aaKnown RBP eCLIP21.29■■□□□ 1
ATG3-208ENST00000495756 ZNF165P49910 485 aa21.29■■□□□ 1
ATG3-208ENST00000495756 MCL1Q07820 350 aa21.29■■□□□ 1
ATG3-208ENST00000495756 NFIL3Q16649 462 aa21.29■■□□□ 1
ATG3-208ENST00000495756 ARMCX5Q6P1M9 558 aa21.29■■□□□ 1
ATG3-208ENST00000495756 FAM43BQ6ZT52 329 aaPredicted RBP21.29■■□□□ 1
ATG3-208ENST00000495756 ZBTB33Q86T24 672 aa21.29■■□□□ 1
ATG3-208ENST00000495756 TMEM174Q8WUU8 243 aa21.29■■□□□ 1
ATG3-208ENST00000495756 APBB2Q92870 758 aa21.29■■□□□ 1
ATG3-208ENST00000495756 DUSP9Q99956 384 aaKnown RBP21.29■■□□□ 1
ATG3-208ENST00000495756 BPIFA3Q9BQP9 254 aa21.29■■□□□ 1
ATG3-208ENST00000495756 ADPGKQ9BRR6 497 aa21.29■■□□□ 1
ATG3-208ENST00000495756 FTHL17Q9BXU8 183 aa21.29■■□□□ 1
ATG3-208ENST00000495756 CDT1Q9H211 546 aa21.29■■□□□ 1
ATG3-208ENST00000495756 ZMYND8Q9ULU4 1186 aaPredicted RBP21.29■■□□□ 1
ATG3-208ENST00000495756 LTBP2Q14767 1821 aa21.29■■□□□ 1
ATG3-208ENST00000495756 MGEA5O60502 916 aa21.28■■□□□ 1
ATG3-208ENST00000495756 NOLC1Q14978 699 aaKnown RBP eCLIP21.28■■□□□ 1
ATG3-208ENST00000495756 UBXN11Q5T124 520 aa21.28■■□□□ 1
ATG3-208ENST00000495756 TWF2Q6IBS0 349 aaKnown RBP21.28■■□□□ 1
ATG3-208ENST00000495756 SLC9A9Q8IVB4 645 aa21.28■■□□□ 1
ATG3-208ENST00000495756 BADQ92934 168 aa21.28■■□□□ 1
ATG3-208ENST00000495756 ADAM2Q99965 735 aa21.28■■□□□ 1
ATG3-208ENST00000495756 MSTO1Q9BUK6 570 aa21.28■■□□□ 1
ATG3-208ENST00000495756 PCIF1Q9H4Z3 704 aa21.28■■□□□ 1
ATG3-208ENST00000495756 MCF2P10911 925 aa21.27■■□□□ 1
ATG3-208ENST00000495756 NR2F2P24468 414 aa21.27■■□□□ 1
ATG3-208ENST00000495756 RPL13P26373 211 aaKnown RBP21.27■■□□□ 1
ATG3-208ENST00000495756 MYBPC2Q14324 1141 aa21.27■■□□□ 1
ATG3-208ENST00000495756 TCTN1Q2MV58 587 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms