RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 TMEM132AQ24JP5 1023 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 EPC2Q52LR7 807 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 LRIG3Q6UXM1 1119 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 CBWD2Q8IUF1 395 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ZC3H3Q8IXZ2 948 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 C1orf131Q8NDD1 294 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 LPAR1Q92633 364 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ZBTB10Q96DT7 871 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 CLMNQ96JQ2 1002 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 CABS1Q96KC9 395 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ZNF408Q9H9D4 720 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 UBE2TQ9NPD8 197 aaPredicted RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 SEPT9Q9UHD8 586 aaPredicted RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 NOVA2Q9UNW9 492 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 FOCADQ5VW36 1801 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 EMSYQ7Z589 1322 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 BRCA2P51587 3418 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 TMEM110-MUSTN1A8MSY1 372 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 DCDC2CA8MYV0 355 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ANKRD63C9JTQ0 380 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 PPP1R12BO60237 982 aaPredicted RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ZNF862O60290 1169 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 MARK3P27448 753 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 IRX3P78415 501 aaPredicted RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 DHX9Q08211 1270 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 PRPF4BQ13523 1007 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ANO5Q75V66 913 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 VPS36Q86VN1 386 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 NCAPG2Q86XI2 1143 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 TMEM143Q96AN5 459 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 CALR3Q96L12 384 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 CEP89Q96ST8 783 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ELP3Q9H9T3 547 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 A1CFQ9NQ94 594 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 TAS2R14Q9NYV8 317 aa9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 ATXN2Q99700 1313 aaKnown RBP9.82□□□□□ -0.84
TM9SF4-207ENST00000495749 GMNCA6NCL1 334 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 FOXN3O00409 490 aaPredicted RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 DDX3XO00571 662 aaKnown RBP eCLIP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 EVI5O60447 810 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 RGS20O76081 388 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 PGK2P07205 417 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 FMO5P49326 533 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 SETQ01105 290 aaPredicted RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 SP2Q02086 613 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 PPP3CAQ08209 521 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 KRT71Q3SY84 523 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 DCAF15Q66K64 600 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 RUFY4Q6ZNE9 571 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 LMBR1Q8WVP7 490 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 BSNDQ8WZ55 320 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 BICD1Q96G01 975 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 RIT2Q99578 217 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 PI4K2AQ9BTU6 479 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 LRRC4CQ9HCJ2 640 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 OSGEPQ9NPF4 335 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 TMOD4Q9NZQ9 345 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 CNOT8Q9UFF9 292 aaKnown RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 SLC12A6Q9UHW9 1150 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 NR2E1Q9Y466 385 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 UBIAD1Q9Y5Z9 338 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 CCDC188H7C350 402 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 FGGP02679 453 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 ZBTB48P10074 688 aaPredicted RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 GAP43P17677 238 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 COPB2P35606 906 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 MAGOHP61326 146 aaKnown RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 QPCTQ16769 361 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 C2CD6Q53TS8 623 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 PCNX4Q63HM2 1172 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 YTHDF3Q7Z739 585 aaKnown RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 PPM1KQ8N3J5 372 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 EIF1ADQ8N9N8 165 aaKnown RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 CCDC26Q8TAB7 109 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 MAGOHBQ96A72 148 aaKnown RBP9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 PPP1R16BQ96T49 567 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 OLFML3Q9NRN5 406 aa9.81□□□□□ -0.84
TM9SF4-207ENST00000495749 DENND3A2RUS2 1198 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 FZD9O00144 591 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 PRKCIP41743 596 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 GALCP54803 685 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 PHLDB3Q6NSJ2 640 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 CCDC121Q6ZUS5 278 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 TMC3Q7Z5M5 1100 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 NT5DC3Q86UY8 548 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 CCDC60Q8IWA6 550 aaPredicted RBP9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 CCDC13Q8IYE1 715 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 PLEKHO2Q8TD55 490 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 PPP1R13LQ8WUF5 828 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 SLC20A1Q8WUM9 679 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 KLRG1Q96E93 195 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 SIX2Q9NPC8 291 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 GPRC5DQ9NZD1 345 aa9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 DDX20Q9UHI6 824 aaKnown RBP9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 ZNF214Q9UL59 606 aaPredicted RBP9.8□□□□□ -0.84
TM9SF4-207ENST00000495749 ATP8A1Q9Y2Q0 1164 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms