RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 CERS5Q8N5B7 392 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 FBXW5Q969U6 566 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 FAM84AQ96KN4 292 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 MPHOSPH8Q99549 860 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 PLA2G12BQ9BX93 195 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 ANKRD2Q9GZV1 360 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 DEFB129Q9H1M3 183 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 CD209Q9NNX6 404 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 TEX51A0A1B0GUA7 166 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 CCDC66A2RUB6 948 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 MANSC4A6NHS7 340 aaPredicted RBP8.02□□□□□ -1.13
VIM-207ENST00000495528 HRKO00198 91 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 ETV2O00321 342 aaPredicted RBP8.02□□□□□ -1.13
VIM-207ENST00000495528 KRIT1O00522 736 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 SLC27A2O14975 620 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 OPA1O60313 960 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 TAF5LO75529 589 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 DNAJC8O75937 253 aaPredicted RBP8.02□□□□□ -1.13
VIM-207ENST00000495528 KRT15P19012 456 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 CDR1P51861 262 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 EPHB3P54753 998 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 CHRNDQ07001 517 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 GCKRQ14397 625 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 ZNF460Q14592 562 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 DLGAP5Q15398 846 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 SYNPOQ8N3V7 929 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 TSPAN17Q96FV3 270 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 CLMNQ96JQ2 1002 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 SLC38A3Q99624 504 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 FEZ1Q99689 392 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 STK31Q9BXU1 1019 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 TRIM17Q9Y577 477 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 PCDHB4Q9Y5E5 795 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 TNPO3Q9Y5L0 923 aaKnown RBP8.02□□□□□ -1.13
VIM-207ENST00000495528 IRS2Q9Y4H2 1338 aa8.02□□□□□ -1.13
VIM-207ENST00000495528 CLRN2A0PK11 232 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 TMEM253P0C7T8 217 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 PMLP29590 882 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 KCNJ4P48050 445 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 INHBEP58166 350 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 SLC9A5Q14940 896 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 TWISTNBQ3B726 338 aaPredicted RBP8.01□□□□□ -1.13
VIM-207ENST00000495528 ABHD17CQ6PCB6 329 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 OTOP1Q7RTM1 612 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 CISD2Q8N5K1 135 aaKnown RBP8.01□□□□□ -1.13
VIM-207ENST00000495528 WNK4Q96J92 1243 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 PRMT6Q96LA8 375 aaPredicted RBP8.01□□□□□ -1.13
VIM-207ENST00000495528 GCM1Q9NP62 436 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 SLC6A20Q9NP91 592 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 MYOTQ9UBF9 498 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 CBLCQ9ULV8 474 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 JAG2Q9Y219 1238 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 PSME4Q14997 1843 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 AOX1Q06278 1338 aa8.01□□□□□ -1.13
VIM-207ENST00000495528 ANKRD18BA2A2Z9 1011 aa8□□□□□ -1.13
VIM-207ENST00000495528 KCNK3O14649 394 aa8□□□□□ -1.13
VIM-207ENST00000495528 SEMA7AO75326 666 aa8□□□□□ -1.13
VIM-207ENST00000495528 RFPL3O75679 317 aa8□□□□□ -1.13
VIM-207ENST00000495528 ZBTB48P10074 688 aaPredicted RBP8□□□□□ -1.13
VIM-207ENST00000495528 PDE6AP16499 860 aa8□□□□□ -1.13
VIM-207ENST00000495528 HSD3B2P26439 372 aa8□□□□□ -1.13
VIM-207ENST00000495528 MC3RP41968 323 aa8□□□□□ -1.13
VIM-207ENST00000495528 DLG4P78352 724 aa8□□□□□ -1.13
VIM-207ENST00000495528 FOXO4P98177 505 aa8□□□□□ -1.13
VIM-207ENST00000495528 CFAP100Q494V2 611 aa8□□□□□ -1.13
VIM-207ENST00000495528 FAM47CQ5HY64 1035 aa8□□□□□ -1.13
VIM-207ENST00000495528 C15orf52Q6ZUT6 534 aaKnown RBP8□□□□□ -1.13
VIM-207ENST00000495528 KIAA0907Q7Z7F0 614 aaPredicted RBP8□□□□□ -1.13
VIM-207ENST00000495528 OSTM1Q86WC4 334 aa8□□□□□ -1.13
VIM-207ENST00000495528 IGSF22Q8N9C0 903 aa8□□□□□ -1.13
VIM-207ENST00000495528 ARRDC4Q8NCT1 418 aa8□□□□□ -1.13
VIM-207ENST00000495528 MZB1Q8WU39 189 aa8□□□□□ -1.13
VIM-207ENST00000495528 NINJ1Q92982 152 aa8□□□□□ -1.13
VIM-207ENST00000495528 PTPN18Q99952 460 aa8□□□□□ -1.13
VIM-207ENST00000495528 PTPN22Q9Y2R2 807 aa8□□□□□ -1.13
VIM-207ENST00000495528 PPP2R3BQ9Y5P8 575 aa8□□□□□ -1.13
VIM-207ENST00000495528 SSC5DA1L4H1 1573 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 MAFKO60675 156 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 TADA3O75528 432 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 LTFP02788 710 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 CKMP06732 381 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 ASGR2P07307 311 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 IL1R1P14778 569 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 IGFALSP35858 605 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 FKBP1AP62942 108 aaKnown RBP7.99□□□□□ -1.13
VIM-207ENST00000495528 CAP1Q01518 475 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 GRIN1Q05586 938 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 IFIT5Q13325 482 aaKnown RBP7.99□□□□□ -1.13
VIM-207ENST00000495528 CRY1Q16526 586 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 SUPT20HL1Q3ZLR7 823 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 EMC4Q5J8M3 183 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 CNNM4Q6P4Q7 775 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 ATG14Q6ZNE5 492 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 ARHGAP36Q6ZRI8 547 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 C16orf59Q7L2K0 433 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 LINS1Q8NG48 757 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 CD99L2Q8TCZ2 262 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 DNAAF4Q8WXU2 420 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 YIPF4Q9BSR8 244 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 CD244Q9BZW8 370 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms