RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 A0A0U1RQF3 1178 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 A0A1W2PPC1 479 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 K7ERI5 159 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 EIF3DO15371 548 aaKnown RBP eCLIP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 ERLIN2O94905 339 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 PRPF4BQ13523 1007 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 ALCAMQ13740 583 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 L1TD1Q5T7N2 865 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 FAM109BQ6ICB4 259 aaPredicted RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 NOTUMQ6P988 496 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 ZPBP2Q6X784 338 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 MRPL10Q7Z7H8 261 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 SMG8Q8ND04 991 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 ERCC4Q92889 916 aaPredicted RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 TOP1MTQ969P6 601 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 TARS2Q9BW92 718 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 ZHX3Q9H4I2 956 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 MRPL44Q9H9J2 332 aaKnown RBP12.12□□□□□ -0.47
KDM1A-205ENST00000494920 C1orf112Q9NSG2 853 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 TNFSF13BQ9Y275 285 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 STYXL1Q9Y6J8 313 aa12.12□□□□□ -0.47
KDM1A-205ENST00000494920 UBE4BO95155 1302 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 REV3LO60673 3130 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 FAM189A1O60320 539 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 BMP6P22004 513 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 ABCD1P33897 745 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 HTRA4P83105 476 aaPredicted RBP12.11□□□□□ -0.47
KDM1A-205ENST00000494920 PSMD2Q13200 908 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 COBLL1Q53SF7 1204 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 ATF7IP2Q5U623 682 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 SLC24A5Q71RS6 500 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 CDR2LQ86X02 465 aaPredicted RBP12.11□□□□□ -0.47
KDM1A-205ENST00000494920 ECHDC2Q86YB7 292 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 PHOSPHO2Q8TCD6 241 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 RNPC3Q96LT9 517 aaKnown RBP12.11□□□□□ -0.47
KDM1A-205ENST00000494920 GSDMAQ96QA5 445 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
KDM1A-205ENST00000494920 CDT1Q9H211 546 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 ELAC1Q9H777 363 aaKnown RBP12.11□□□□□ -0.47
KDM1A-205ENST00000494920 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
KDM1A-205ENST00000494920 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
KDM1A-205ENST00000494920 MEIS3P2A8K0S8 358 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 TISP43B9A030 160 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 ANKRD63C9JTQ0 380 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 N4BP3O15049 544 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 INPPL1O15357 1258 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 MEFVO15553 781 aaPredicted RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 TGFB1I1O43294 461 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 TOM1L1O75674 476 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 PRPF6O94906 941 aaKnown RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 GJB5O95377 273 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 GCNT3O95395 438 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 MBD3O95983 291 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 ZSCAN20P17040 1043 aaPredicted RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 ADSSP30520 456 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 RAB27AP51159 221 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 MCL1Q07820 350 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 SLC27A1Q6PCB7 646 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 TMCO2Q7Z6W1 182 aaPredicted RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 NPAS4Q8IUM7 802 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 ZNF689Q96CS4 500 aaPredicted RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 CCDC34Q96HJ3 373 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 ZBTB45Q96K62 511 aaPredicted RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
KDM1A-205ENST00000494920 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 EXOC1Q9NV70 894 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 TMEM161AQ9NX61 479 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 MAN1B1Q9UKM7 699 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 GDAQ9Y2T3 454 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 PCDHB2Q9Y5E7 798 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
KDM1A-205ENST00000494920 TDRD15B5MCY1 1934 aaKnown RBP12.09□□□□□ -0.47
KDM1A-205ENST00000494920 SPTBN5Q9NRC6 3674 aaKnown RBP12.09□□□□□ -0.47
KDM1A-205ENST00000494920 NLRC5Q86WI3 1866 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 A0A0B4J269 797 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 AMHP03971 560 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 STRN3Q13033 797 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 MORC3Q14149 939 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 DCAF4L1Q3SXM0 396 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 MPZL3Q6UWV2 235 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 HERC6Q8IVU3 1022 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 MYOCDQ8IZQ8 938 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
KDM1A-205ENST00000494920 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 ACCSQ96QU6 501 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms