RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 PCDHA4Q9UN74 947 aa17.74■□□□□ 0.43
COL4A2-209ENST00000494852 DKC1O60832 514 aaKnown RBP eCLIP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 RFPL2O75678 378 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 QARSP47897 775 aaKnown RBP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 GLUD2P49448 558 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 DSG1Q02413 1049 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 PLA2G4FQ68DD2 849 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 ZC3H14Q6PJT7 736 aaKnown RBP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 PSPC1Q8WXF1 523 aaKnown RBP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 SMG7Q92540 1137 aaKnown RBP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 ZNF707Q96C28 371 aaPredicted RBP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 DHX33Q9H6R0 707 aaKnown RBP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 CHST7Q9NS84 486 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 DLGAP2Q9P1A6 1054 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 CA14Q9ULX7 337 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 PRG3Q9Y2Y8 225 aaPredicted RBP17.73■□□□□ 0.43
COL4A2-209ENST00000494852 SIT1Q9Y3P8 196 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 R4GN57 208 aa17.73■□□□□ 0.43
COL4A2-209ENST00000494852 M0R2N6 131 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 ASAP2O43150 1006 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 SRGAP2CP0DJJ0 459 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 LAMP2P13473 410 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 ITGA4P13612 1032 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 OR1G1P47890 313 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 NPEPPSP55786 919 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 DSC1Q08554 894 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 LAMTOR4Q0VGL1 99 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 PCBP1Q15365 356 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL4A2-209ENST00000494852 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 GPR65Q8IYL9 337 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 SMG8Q8ND04 991 aaKnown RBP17.72■□□□□ 0.43
COL4A2-209ENST00000494852 GPR152Q8TDT2 470 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 SLC2A4RGQ9NR83 387 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 ZDHHC7Q9NXF8 308 aa17.72■□□□□ 0.43
COL4A2-209ENST00000494852 ARL5CA6NH57 179 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 ANHXE9PGG2 379 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 EML1O00423 815 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 GAS2O43903 313 aaKnown RBP17.71■□□□□ 0.43
COL4A2-209ENST00000494852 NR1I2O75469 434 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 SP9P0CG40 484 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 PSMA5P28066 241 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 AXLP30530 894 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 RFC5P40937 340 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 EVCP57679 992 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 PPP2R5CQ13362 524 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 DGLUCYQ7Z3D6 616 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 C1orf210Q8IVY1 113 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 KIAA2013Q8IYS2 634 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 ZNF579Q8NAF0 562 aaKnown RBP17.71■□□□□ 0.43
COL4A2-209ENST00000494852 RIN2Q8WYP3 895 aaPredicted RBP17.71■□□□□ 0.43
COL4A2-209ENST00000494852 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 CEP170P1Q96L14 293 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 PIDD1Q9HB75 910 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 ARHGEF3Q9NR81 526 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.71■□□□□ 0.43
COL4A2-209ENST00000494852 DDX25Q9UHL0 483 aaKnown RBP17.71■□□□□ 0.43
COL4A2-209ENST00000494852 IPPQ9Y573 584 aa17.71■□□□□ 0.43
COL4A2-209ENST00000494852 TGM5O43548 720 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 P4HBP07237 508 aaKnown RBP17.7■□□□□ 0.42
COL4A2-209ENST00000494852 DCNP07585 359 aaKnown RBP17.7■□□□□ 0.42
COL4A2-209ENST00000494852 RPS6KB1P23443 525 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 PDIA3P30101 505 aaKnown RBP17.7■□□□□ 0.42
COL4A2-209ENST00000494852 HTR4Q13639 388 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 PUM1Q14671 1186 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL4A2-209ENST00000494852 SPECC1Q5M775 1068 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 LILRA6Q6PI73 481 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 BLIDQ8IZY5 108 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 FAM177A1Q8N128 213 aaPredicted RBP17.7■□□□□ 0.42
COL4A2-209ENST00000494852 DAGLBQ8NCG7 672 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 TCP11Q8WWU5 503 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 CCDC51Q96ER9 411 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 GAD1Q99259 594 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 PRKD2Q9BZL6 878 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 FNIP2Q9P278 1114 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 VAV3Q9UKW4 847 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 ZFP37Q9Y6Q3 630 aaPredicted RBP17.7■□□□□ 0.42
COL4A2-209ENST00000494852 DOCK8Q8NF50 2099 aa17.7■□□□□ 0.42
COL4A2-209ENST00000494852 MED19A0JLT2 244 aaPredicted RBP17.69■□□□□ 0.42
COL4A2-209ENST00000494852 ERLIN2O94905 339 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 SPATA31D3P0C874 917 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 MYBP10242 640 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
COL4A2-209ENST00000494852 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 DCLRE1AQ6PJP8 1040 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 POTEGQ6S5H5 508 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 SPATA31D4Q6ZUB0 917 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 FERMT3Q86UX7 667 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 PALB2Q86YC2 1186 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 C4orf19Q8IY42 314 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 TRIM22Q8IYM9 498 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 RNF149Q8NC42 400 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 RUBCNQ92622 972 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 BORCS6Q96GS4 357 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 FAM20AQ96MK3 541 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 EIF2AQ9BY44 585 aaKnown RBP17.69■□□□□ 0.42
COL4A2-209ENST00000494852 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 MIOSQ9NXC5 875 aa17.69■□□□□ 0.42
COL4A2-209ENST00000494852 WRAP73Q9P2S5 460 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms