RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ASCL5Q7RTU5 278 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 COLGALT2Q8IYK4 626 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 GPR65Q8IYL9 337 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
PCCB-219ENST00000494742 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
PCCB-219ENST00000494742 RNF149Q8NC42 400 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 STAMQ92783 540 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 LXNQ9BS40 222 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 ZSWIM4Q9H7M6 989 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 WRAP73Q9P2S5 460 aaPredicted RBP16.32■□□□□ 0.2
PCCB-219ENST00000494742 MYO15AQ9UKN7 3530 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 STK36Q9NRP7 1315 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 SSBP05455 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCCB-219ENST00000494742 DSC1Q08554 894 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 CWF19L1Q69YN2 538 aaKnown RBP16.31■□□□□ 0.2
PCCB-219ENST00000494742 NOTUMQ6P988 496 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
PCCB-219ENST00000494742 SLFN12Q8IYM2 578 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
PCCB-219ENST00000494742 FLCNQ8NFG4 579 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 HAS1Q92839 578 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 NXPE3Q969Y0 559 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 AIFM3Q96NN9 605 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 RXFP1Q9HBX9 757 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 WDR6Q9NNW5 1121 aaKnown RBP16.31■□□□□ 0.2
PCCB-219ENST00000494742 MAN1C1Q9NR34 630 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 MARCH5Q9NX47 278 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 IPPQ9Y573 584 aa16.31■□□□□ 0.2
PCCB-219ENST00000494742 TDRD15B5MCY1 1934 aaKnown RBP16.31■□□□□ 0.2
PCCB-219ENST00000494742 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 ARL5CA6NH57 179 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 TEX28O15482 410 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 MARCH6O60337 910 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
PCCB-219ENST00000494742 BAG4O95429 457 aaKnown RBP16.3■□□□□ 0.2
PCCB-219ENST00000494742 GLUD1P00367 558 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 NPR3P17342 541 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 GLUD2P49448 558 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 AK2P54819 239 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 PTENP60484 403 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 TFDP1Q14186 410 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 XKR9Q5GH70 373 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 KIAA0319Q5VV43 1072 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 CCDC105Q8IYK2 499 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 HACE1Q8IYU2 909 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 NKD2Q969F2 451 aaPredicted RBP16.3■□□□□ 0.2
PCCB-219ENST00000494742 MTRQ99707 1265 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 WNT16Q9UBV4 365 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 FBXL21Q9UKT6 434 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 KCNJ14Q9UNX9 436 aa16.3■□□□□ 0.2
PCCB-219ENST00000494742 MTCL1Q9Y4B5 1905 aaKnown RBP16.29■□□□□ 0.2
PCCB-219ENST00000494742 ZMYM2Q9UBW7 1377 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 C2CD2LO14523 706 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 TSPAN1O60635 241 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 OR1G1P47890 313 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 DSG1Q02413 1049 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 STK3Q13188 491 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 FEZF2Q8TBJ5 459 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 COLEC11Q9BWP8 271 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 NFKBIZQ9BYH8 718 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 CSRNP2Q9H175 543 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 PLEKHA4Q9H4M7 779 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCCB-219ENST00000494742 CHST7Q9NS84 486 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 RGL1Q9NZL6 768 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 EPS15L1Q9UBC2 864 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
PCCB-219ENST00000494742 PRG3Q9Y2Y8 225 aaPredicted RBP16.29■□□□□ 0.2
PCCB-219ENST00000494742 CLUHO75153 1309 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 LYPLA2O95372 231 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 MLH1P40692 756 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 CREMQ03060 361 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 NCAPH2Q6IBW4 605 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 FRMD5Q7Z6J6 570 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 SIX5Q8N196 739 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 DTWD2Q8NBA8 298 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 DYDC2Q96IM9 177 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 GAD1Q99259 594 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 EIF2AQ9BY44 585 aaKnown RBP16.28■□□□□ 0.2
PCCB-219ENST00000494742 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 ZDHHC7Q9NXF8 308 aa16.28■□□□□ 0.2
PCCB-219ENST00000494742 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.28■□□□□ 0.2
PCCB-219ENST00000494742 PI15O43692 258 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.2
PCCB-219ENST00000494742 DGAT1O75907 488 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 SLITRK3O94933 977 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
PCCB-219ENST00000494742 SCRN1Q12765 414 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 PIK3AP1Q6ZUJ8 805 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 TAS1R1Q7RTX1 841 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 WASF1Q92558 559 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 LARP6Q9BRS8 491 aaKnown RBP16.27■□□□□ 0.2
PCCB-219ENST00000494742 TRIM6Q9C030 488 aaPredicted RBP16.27■□□□□ 0.2
PCCB-219ENST00000494742 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 SEMA4AQ9H3S1 761 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 XPNPEP1Q9NQW7 623 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms