RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 APOL6Q9BWW8 343 aa22.87■■□□□ 1.25
CCDC12-207ENST00000494655 EIF2AQ9BY44 585 aaKnown RBP22.87■■□□□ 1.25
CCDC12-207ENST00000494655 KANSL3Q9P2N6 904 aa22.87■■□□□ 1.25
CCDC12-207ENST00000494655 THEGQ9P2T0 379 aa22.87■■□□□ 1.25
CCDC12-207ENST00000494655 PLXNA4Q9HCM2 1894 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 SCP2P22307 547 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 ALDH7A1P49419 539 aaKnown RBP22.86■■□□□ 1.25
CCDC12-207ENST00000494655 DCAF4L1Q3SXM0 396 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 SPIRE2Q8WWL2 714 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 REEP2Q9BRK0 252 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 MRPL4Q9BYD3 311 aaKnown RBP22.86■■□□□ 1.25
CCDC12-207ENST00000494655 NSUN3Q9H649 340 aaKnown RBP22.86■■□□□ 1.25
CCDC12-207ENST00000494655 CWH43Q9H720 699 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 ALG13Q9NP73 1137 aaKnown RBP22.86■■□□□ 1.25
CCDC12-207ENST00000494655 BLOC1S4Q9NUP1 217 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 PLAGL2Q9UPG8 496 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 ZMYM2Q9UBW7 1377 aa22.86■■□□□ 1.25
CCDC12-207ENST00000494655 COL6A3P12111 3177 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 GRM6O15303 877 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 CUTAO60888 179 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 ZC3H11AO75152 810 aaKnown RBP eCLIP22.85■■□□□ 1.25
CCDC12-207ENST00000494655 FGF18O76093 207 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 ITGB1P05556 798 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 DDIT3P35638 169 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 ME1P48163 572 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 KRT17Q04695 432 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 ATF7IP2Q5U623 682 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 KCNT2Q6UVM3 1135 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 AGMOQ6ZNB7 445 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 USP49Q70CQ1 688 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 CDR2LQ86X02 465 aaPredicted RBP22.85■■□□□ 1.25
CCDC12-207ENST00000494655 SMG8Q8ND04 991 aaKnown RBP22.85■■□□□ 1.25
CCDC12-207ENST00000494655 NXF3Q9H4D5 531 aaKnown RBP22.85■■□□□ 1.25
CCDC12-207ENST00000494655 ZHX3Q9H4I2 956 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 PDZD7Q9H5P4 517 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 TMEM134Q9H6X4 195 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 PARVGQ9HBI0 331 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 TBC1D13Q9NVG8 400 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 ARHGAP28Q9P2N2 729 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 HCSTQ9UBK5 93 aa22.85■■□□□ 1.25
CCDC12-207ENST00000494655 PUF60Q9UHX1 559 aaKnown RBP22.85■■□□□ 1.25
CCDC12-207ENST00000494655 MEIS3P2A8K0S8 358 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 SLC16A4O15374 487 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 OFD1O75665 1012 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 CSPG5O95196 566 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 ABCD1P33897 745 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 CACNB1Q02641 598 aaPredicted RBP22.84■■□□□ 1.25
CCDC12-207ENST00000494655 LRRC55Q6ZSA7 311 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 SV2BQ7L1I2 683 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 RPS6KC1Q96S38 1066 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 GBP3Q9H0R5 595 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 SPG21Q9NZD8 308 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 GIT1Q9Y2X7 761 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 HES2Q9Y543 173 aa22.84■■□□□ 1.25
CCDC12-207ENST00000494655 TDRD15B5MCY1 1934 aaKnown RBP22.84■■□□□ 1.25
CCDC12-207ENST00000494655 NPHP3-ACAD11A0A0J9YXS1 232 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 SFI1A8K8P3 1242 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 BRD1O95696 1058 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 MLH1P40692 756 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 KRT85P78386 507 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 DNM1Q05193 864 aaKnown RBP22.83■■□□□ 1.25
CCDC12-207ENST00000494655 MYCT1Q8N699 235 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 POF1BQ8WVV4 589 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 TMEM169Q96HH4 297 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 PARP2Q9UGN5 583 aa22.83■■□□□ 1.25
CCDC12-207ENST00000494655 ATG2AQ2TAZ0 1938 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 K7ENM7 598 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 NR1I2O75469 434 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 BCAR1P56945 870 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 BMS1Q14692 1282 aaKnown RBP22.82■■□□□ 1.24
CCDC12-207ENST00000494655 AAK1Q2M2I8 961 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 ZNF568Q3ZCX4 644 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 ARSHQ5FYA8 562 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 SPPL3Q8TCT6 385 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 NTPCRQ9BSD7 190 aaKnown RBP22.82■■□□□ 1.24
CCDC12-207ENST00000494655 TLR9Q9NR96 1032 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 FAM13BQ9NYF5 915 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 COG5Q9UP83 839 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 LZTS1Q9Y250 596 aa22.82■■□□□ 1.24
CCDC12-207ENST00000494655 ARL5CA6NH57 179 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 POMCP01189 267 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 PLCB3Q01970 1234 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 PDE12Q6L8Q7 609 aaKnown RBP22.81■■□□□ 1.24
CCDC12-207ENST00000494655 PDILTQ8N807 584 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 MICAL1Q8TDZ2 1067 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 MRPS27Q92552 414 aaKnown RBP22.81■■□□□ 1.24
CCDC12-207ENST00000494655 BICD1Q96G01 975 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 GAD1Q99259 594 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 TCHPQ9BT92 498 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 LRRC27Q9C0I9 530 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 CUEDC2Q9H467 287 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 TNFSF13BQ9Y275 285 aa22.81■■□□□ 1.24
CCDC12-207ENST00000494655 AKAP5P24588 427 aa22.8■■□□□ 1.24
CCDC12-207ENST00000494655 PBX3P40426 434 aa22.8■■□□□ 1.24
CCDC12-207ENST00000494655 GIT2Q14161 759 aa22.8■■□□□ 1.24
CCDC12-207ENST00000494655 FAM178BQ8IXR5 827 aa22.8■■□□□ 1.24
CCDC12-207ENST00000494655 SLC39A11Q8N1S5 342 aa22.8■■□□□ 1.24
CCDC12-207ENST00000494655 TMEM161BQ8NDZ6 487 aa22.8■■□□□ 1.24
CCDC12-207ENST00000494655 LRRC15Q8TF66 581 aa22.8■■□□□ 1.24
CCDC12-207ENST00000494655 HLA-CQ95604 372 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms