RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PDP2Q9P2J9 529 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 PCYOX1Q9UHG3 505 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 RASAL2Q9UJF2 1139 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 USH1CQ9Y6N9 552 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 KCPQ6ZWJ8 1503 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 ARAP2Q8WZ64 1704 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 EDIL3O43854 480 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 SPAG7O75391 227 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 GFPT2O94808 682 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 CTNNA2P26232 953 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 PTPN4P29074 926 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 ABCD1P33897 745 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 ERFP50548 548 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 DEUP1Q05D60 604 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 SLC34A1Q06495 639 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 LLGL1Q15334 1064 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 KYNUQ16719 465 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 PLEKHG4Q58EX7 1191 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 TRIM42Q8IWZ5 723 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 FBXO41Q8TF61 875 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 PRR11Q96HE9 360 aaPredicted RBP10.86□□□□□ -0.67
LINC00488-201ENST00000494582 SLX1AQ9BQ83 275 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 YIPF2Q9BWQ6 316 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 STK32BQ9NY57 414 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 CHORDC1Q9UHD1 332 aaPredicted RBP10.86□□□□□ -0.67
LINC00488-201ENST00000494582 TMCO1Q9UM00 188 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 STARD13Q9Y3M8 1113 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 PCDHA2Q9Y5H9 948 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 NCANO14594 1321 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 KAT6BQ8WYB5 2073 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 MAPK13O15264 365 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 PSMG1O95456 288 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 GRIA2P42262 883 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 AP1B1Q10567 949 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 TTLL12Q14166 644 aaPredicted RBP10.85□□□□□ -0.67
LINC00488-201ENST00000494582 LIN52Q52LA3 116 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 NLRP10Q86W26 655 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 SCFD1Q8WVM8 642 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 CEP63Q96MT8 703 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 KANSL3Q9P2N6 904 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 MAD2L2Q9UI95 211 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 HDAC9Q9UKV0 1011 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 NAALADL1Q9UQQ1 740 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 TBC1D30Q9Y2I9 924 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 SLC37A4O43826 429 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 EXOC3O60645 756 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 SLC5A1P13866 664 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 CHRNA3P32297 505 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 EPS15P42566 896 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 FAM26FQ5R3K3 315 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 RFX8Q6ZV50 586 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 RFFLQ8WZ73 363 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 GRAMD1AQ96CP6 724 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 ZNF184Q99676 751 aaPredicted RBP10.85□□□□□ -0.67
LINC00488-201ENST00000494582 THAP2Q9H0W7 228 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00488-201ENST00000494582 TMEM260Q9NX78 707 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 BARHL2Q9NY43 387 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00488-201ENST00000494582 ASAP1Q9ULH1 1129 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 BZW2Q9Y6E2 419 aaKnown RBP10.85□□□□□ -0.67
LINC00488-201ENST00000494582 SLC4A7Q9Y6M7 1214 aa10.85□□□□□ -0.67
LINC00488-201ENST00000494582 RNASEH1O60930 286 aaKnown RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 ASMTLO95671 621 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 TTLL1O95922 423 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 LMNAP02545 664 aaKnown RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 STRN3Q13033 797 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 SIX1Q15475 284 aaPredicted RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 DDB1Q16531 1140 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 TRMT10CQ7L0Y3 403 aaKnown RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 TBCKQ8TEA7 893 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 DYDC2Q96IM9 177 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 DNAJC1Q96KC8 554 aaKnown RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 MTMR9Q96QG7 549 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 ASCC2Q9H1I8 757 aaPredicted RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 VCX3BQ9H321 246 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 VCX3AQ9NNX9 186 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 IL17RBQ9NRM6 502 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 ARL8BQ9NVJ2 186 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 DDX43Q9NXZ2 648 aaKnown RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 TRPM3Q9HCF6 1732 aaPredicted RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 KIF13BQ9NQT8 1826 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 PALM3A6NDB9 673 aaPredicted RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 MAGEB2O15479 319 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 OR6B1O95007 311 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 GOLGA8HP0CJ92 632 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 AMPD1P23109 780 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 ALDH1B1P30837 517 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 CASP5P51878 434 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 CDR2Q01850 454 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 PPP2R5CQ13362 524 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 EPHA7Q15375 998 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 DUS1LQ6P1R4 473 aaKnown RBP10.84□□□□□ -0.67
LINC00488-201ENST00000494582 RHBDF2Q6PJF5 856 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 FOXR2Q6PJQ5 311 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 ARHGEF18Q6ZSZ5 1173 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 CCDC125Q86Z20 511 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms