RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PRRX2Q99811 253 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 XPNPEP1Q9NQW7 623 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 MARCH5Q9NX47 278 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 ORC3Q9UBD5 711 aaPredicted RBP14.1□□□□□ -0.15
SKA1-205ENST00000494518 WDR87Q6ZQQ6 2873 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 TRIP11Q15643 1979 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 TSPAN1O60635 241 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 PFKFB2O60825 505 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 ALDH2P05091 517 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 XBP1P17861 261 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 MLH1P40692 756 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 CLCN4P51793 760 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 AK2P54819 239 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 SPIRE1Q08AE8 756 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 OTUD6AQ7L8S5 288 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 CDR2LQ86X02 465 aaPredicted RBP14.09□□□□□ -0.15
SKA1-205ENST00000494518 UBALD2Q8IYN6 164 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 ZDHHC14Q8IZN3 488 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 FAM177A1Q8N128 213 aaPredicted RBP14.09□□□□□ -0.15
SKA1-205ENST00000494518 TMEM105Q8N8V8 129 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 ASAP3Q8TDY4 903 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 RSPH1Q8WYR4 309 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 GAD1Q99259 594 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 EMILIN2Q9BXX0 1053 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 ZSWIM4Q9H7M6 989 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 SFXN1Q9H9B4 322 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 IPPQ9Y573 584 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 CNTNAP2Q9UHC6 1331 aa14.09□□□□□ -0.15
SKA1-205ENST00000494518 INO80B-WBP1J3KQ70 363 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 WNT7AO00755 349 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 EPB41L2O43491 1005 aaKnown RBP14.08□□□□□ -0.16
SKA1-205ENST00000494518 GFRA3O60609 400 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
SKA1-205ENST00000494518 LARGE1O95461 756 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 URODP06132 367 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.16
SKA1-205ENST00000494518 KRT2P35908 639 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 SCNN1GP51170 649 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 CCDC149Q6ZUS6 474 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 GPR149Q86SP6 731 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 PPFIBP1Q86W92 1011 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 RABGGTAQ92696 567 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 B3GALT6Q96L58 329 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 ZFP42Q96MM3 310 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 EIF2AK1Q9BQI3 630 aaKnown RBP14.08□□□□□ -0.16
SKA1-205ENST00000494518 TMEM175Q9BSA9 504 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 MFSD1Q9H3U5 465 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 MAN1C1Q9NR34 630 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.16
SKA1-205ENST00000494518 MIOSQ9NXC5 875 aa14.08□□□□□ -0.16
SKA1-205ENST00000494518 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
SKA1-205ENST00000494518 CARNS1A5YM72 827 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 TBX3O15119 743 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 GALR2O43603 387 aaPredicted RBP14.07□□□□□ -0.16
SKA1-205ENST00000494518 LILRB3O75022 631 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 SLITRK3O94933 977 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 SOD2P04179 222 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 SPATA31D3P0C874 917 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 FDPSP14324 419 aaKnown RBP14.07□□□□□ -0.16
SKA1-205ENST00000494518 PTENP60484 403 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 CAPSQ13938 189 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 SPATA31D4Q6ZUB0 917 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 GLYCTKQ8IVS8 523 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 COLGALT2Q8IYK4 626 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 FLCNQ8NFG4 579 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
SKA1-205ENST00000494518 NAP1L4Q99733 375 aaKnown RBP14.07□□□□□ -0.16
SKA1-205ENST00000494518 HERC2P3Q9BVR0 1158 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 NXF3Q9H4D5 531 aaKnown RBP14.07□□□□□ -0.16
SKA1-205ENST00000494518 KANSL3Q9P2N6 904 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 CACNG4Q9UBN1 327 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 PPME1Q9Y570 386 aa14.07□□□□□ -0.16
SKA1-205ENST00000494518 ARL5CA6NH57 179 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 TEX28O15482 410 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 ASAP2O43150 1006 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 B4GALT5O43286 388 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 GAS2O43903 313 aaKnown RBP14.06□□□□□ -0.16
SKA1-205ENST00000494518 RFPL2O75678 378 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 NPTXRO95502 500 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 AKAP5P24588 427 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 MBTD1Q05BQ5 628 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 CALCRLQ16602 461 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 NOTUMQ6P988 496 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 MAEAQ7L5Y9 396 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 SLFN12Q8IYM2 578 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 PIGOQ8TEQ8 1089 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 TNFRSF25Q93038 417 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 ACSF2Q96CM8 615 aaPredicted RBP14.06□□□□□ -0.16
SKA1-205ENST00000494518 RPS6KC1Q96S38 1066 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 TRIM6Q9C030 488 aaPredicted RBP14.06□□□□□ -0.16
SKA1-205ENST00000494518 POLR3FQ9H1D9 316 aaPredicted RBP14.06□□□□□ -0.16
SKA1-205ENST00000494518 KLK14Q9P0G3 267 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 USTQ9Y2C2 406 aa14.06□□□□□ -0.16
SKA1-205ENST00000494518 INPPL1O15357 1258 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 JAK2O60674 1132 aa14.05□□□□□ -0.16
SKA1-205ENST00000494518 USO1O60763 962 aaKnown RBP14.05□□□□□ -0.16
SKA1-205ENST00000494518 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms