RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FOXD4L6Q3SYB3 417 aaPredicted RBP16.23■□□□□ 0.19
ATG4B-224ENST00000494132 PLPP4Q5VZY2 271 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 FOXD4L3Q6VB84 417 aaPredicted RBP16.23■□□□□ 0.19
ATG4B-224ENST00000494132 URGCPQ8TCY9 931 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 CALML4Q96GE6 196 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 AK8Q96MA6 479 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 ZFP42Q96MM3 310 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 CLIC6Q96NY7 704 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 NT5C3AQ9H0P0 336 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 C2orf40Q9H1Z8 148 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 MIOSQ9NXC5 875 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 KLK14Q9P0G3 267 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 XIRP2A4UGR9 3374 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 TCHHQ07283 1943 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 CNTNAP2Q9UHC6 1331 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 A0A0C4DFX4 3053 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-224ENST00000494132 A0A1B0GUA9 196 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PER2O15055 1255 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 DDHD2O94830 711 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PLCG1P19174 1290 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 NRIP1P48552 1158 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 SLC12A3P55017 1021 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 DLX2Q07687 328 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-224ENST00000494132 CLUL1Q15846 466 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 SLC27A1Q6PCB7 646 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PPP4R3CPQ6ZMV5 832 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 SLC39A11Q8N1S5 342 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 SYT2Q8N9I0 419 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-224ENST00000494132 ADAMTS19Q8TE59 1207 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 BCL7CQ8WUZ0 217 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-224ENST00000494132 MRPS27Q92552 414 aaKnown RBP16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PABPC5Q96DU9 382 aaKnown RBP16.22■□□□□ 0.19
ATG4B-224ENST00000494132 CCDC51Q96ER9 411 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 EPSTI1Q96J88 318 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PDZD7Q9H5P4 517 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 ENTPD7Q9NQZ7 604 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 BLOC1S4Q9NUP1 217 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 SPG21Q9NZD8 308 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-224ENST00000494132 CUL9Q8IWT3 2517 aa16.22■□□□□ 0.19
ATG4B-224ENST00000494132 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
ATG4B-224ENST00000494132 BMP1P13497 986 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 CA8P35219 290 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 LONP1P36776 959 aaKnown RBP16.21■□□□□ 0.19
ATG4B-224ENST00000494132 NPTX2P47972 431 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 SLC11A1P49279 550 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 ALDH7A1P49419 539 aaKnown RBP16.21■□□□□ 0.19
ATG4B-224ENST00000494132 SCNN1GP51170 649 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 RBM10P98175 930 aaKnown RBP16.21■□□□□ 0.19
ATG4B-224ENST00000494132 PLCB3Q01970 1234 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 UBE3AQ05086 875 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 DMP1Q13316 513 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-224ENST00000494132 PKP1Q13835 747 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 MCM6Q14566 821 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 FAM187BQ17R55 369 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 CNNM3Q8NE01 707 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 TMEM169Q96HH4 297 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 TCF25Q9BQ70 676 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 KMT5AQ9NQR1 393 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 PARP2Q9UGN5 583 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 NCOR1O75376 2440 aa16.21■□□□□ 0.19
ATG4B-224ENST00000494132 TTC28Q96AY4 2481 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 ARL5CA6NH57 179 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 HIDE1A8MVS5 230 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 ACKR2O00590 384 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 SLC16A4O15374 487 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 TBX10O75333 385 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 GALTP07902 379 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 PPM1AP35813 382 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 LTBRP36941 435 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 KRT17Q04695 432 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 AAK1Q2M2I8 961 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 NT5DC1Q5TFE4 455 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 TAS1R3Q7RTX0 852 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 GPBP1Q86WP2 473 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-224ENST00000494132 AUTS2Q8WXX7 1259 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
ATG4B-224ENST00000494132 DRC1Q96MC2 740 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 FAM193BQ96PV7 902 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-224ENST00000494132 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 ZSCAN16Q9H4T2 348 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-224ENST00000494132 SNTG2Q9NY99 539 aa16.2■□□□□ 0.18
ATG4B-224ENST00000494132 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
ATG4B-224ENST00000494132 PRG3Q9Y2Y8 225 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-224ENST00000494132 F8W810 466 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 K7ERI5 159 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 FSCN2O14926 492 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 N4BP3O15049 544 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 IL9P15248 144 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 GUCY2CP25092 1073 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 ARSHQ5FYA8 562 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 TMC7Q7Z402 723 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 RABGGTAQ92696 567 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 RAD54LQ92698 747 aa16.19■□□□□ 0.18
ATG4B-224ENST00000494132 REEP2Q9BRK0 252 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms