RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 VWA3BQ502W6 1294 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 IQSEC1Q6DN90 963 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 CCDC62Q6P9F0 684 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 LRRC55Q6ZSA7 311 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 ARMCX2Q7L311 632 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 TCP11Q8WWU5 503 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 SOCS4Q8WXH5 440 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 FGD4Q96M96 766 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 CEP89Q96ST8 783 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 PAIP2Q9BPZ3 127 aaKnown RBP7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 STRA6Q9BX79 667 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 GBP3Q9H0R5 595 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 PORCNQ9H237 461 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 ABHD16BQ9H3Z7 469 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 SMARCAD1Q9H4L7 1026 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 EFCC1Q9HA90 598 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 CYP26B1Q9NR63 512 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 WRAP73Q9P2S5 460 aaPredicted RBP7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 SUN2Q9UH99 717 aa7.31□□□□□ -1.24
FNDC3B-212ENST00000494000 MYH9P35579 1960 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 A0A1W2PQJ5 194 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 STX10O60499 249 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 NBNO60934 754 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 GH1P01241 217 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 EPB42P16452 691 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 NCKAP1LP55160 1127 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 GTF2BQ00403 316 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 TBC1D8BQ0IIM8 1120 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 MAPK7Q13164 816 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 IFNL1Q8IU54 200 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 CCDC89Q8N998 374 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 ZNF397Q8NF99 534 aaPredicted RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 TBC1D31Q96DN5 1066 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 PTPN18Q99952 460 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 MFRPQ9BY79 579 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 NUCKS1Q9H1E3 243 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 PDLIM7Q9NR12 457 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 UQCRHLA0A096LP55 91 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 GSTTP1A0A1W2PQM5 241 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 TLR2O60603 784 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 USO1O60763 962 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 STBD1O95210 358 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 PGK2P07205 417 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 UQCRHP07919 91 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 TXNP10599 105 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 VAMP1P23763 118 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 OAS2P29728 719 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 SEC13P55735 322 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 BPIFB3P59826 476 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 PSMC1P62191 440 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 SP2Q02086 613 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 UGCGQ16739 394 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 ANO5Q75V66 913 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 KRT77Q7Z794 578 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 USP37Q86T82 979 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 CCDC60Q8IWA6 550 aaPredicted RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 KIAA1524Q8TCG1 905 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 SLC7A3Q8WY07 619 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 CENPTQ96BT3 561 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 RNPC3Q96LT9 517 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 VPS16Q9H269 839 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 INTS13Q9NVM9 706 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 TAB2Q9NYJ8 693 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 TBC1D7Q9P0N9 293 aa7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 SEPT9Q9UHD8 586 aaPredicted RBP7.3□□□□□ -1.24
FNDC3B-212ENST00000494000 COL1A2P08123 1366 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 GOLGA6L9A6NEM1 432 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 RSPH10B2B2RC85 870 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 K7ENM7 598 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 KIF2AO00139 706 aaPredicted RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 ARHGAP6O43182 974 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 HBP1O60381 514 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 NR3C1P04150 777 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 RSPH10BP0C881 870 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 NR2F2P24468 414 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 PSMC2P35998 433 aaKnown RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 POLGP54098 1239 aaPredicted RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 CBX1P83916 185 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 OLFML2BQ68BL8 750 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 SMYD5Q6GMV2 418 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 C17orf99Q6UX52 265 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 MILR1Q7Z6M3 343 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 SYCP3Q8IZU3 236 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 CACTINQ8WUQ7 758 aaKnown RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 HPS3Q969F9 1004 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 FIZ1Q96SL8 496 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 GPR20Q99678 358 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 NDST4Q9H3R1 872 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 DHX33Q9H6R0 707 aaKnown RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 ARMCX3Q9UH62 379 aaPredicted RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 R3HCC1Q9Y3T6 440 aaKnown RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 N6AMT1Q9Y5N5 214 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 GTPBP10A4D1E9 387 aaKnown RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 ASAP2O43150 1006 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 ZNF862O60290 1169 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 N4BP1O75113 896 aaKnown RBP7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 TOMM70O94826 608 aa7.29□□□□□ -1.24
FNDC3B-212ENST00000494000 PRPF6O94906 941 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms