RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 NFX1Q12986 1120 aaKnown RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 LPIN1Q14693 890 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 FAM26DQ5JW98 314 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 SPATA1Q5VX52 437 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 EEF1DP3Q658K8 133 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 PPP4R3CPQ6ZMV5 832 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 ZNF710Q8N1W2 664 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 POMGNT1Q8WZA1 660 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 KCNN1Q92952 543 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 ACO2Q99798 780 aaKnown RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 TCHPQ9BT92 498 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 FANCLQ9NW38 375 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 TRAF3IP3Q9Y228 551 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 PIN4Q9Y237 131 aaKnown RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 ALPK3Q96L96 1907 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 GOLGA6L19H0YKK7 550 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 ADSSP30520 456 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 CD52P31358 61 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 CYP2C18P33260 490 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 CCL23P55773 120 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 MBTPS1Q14703 1052 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 FAM187BQ17R55 369 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 ZNF568Q3ZCX4 644 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 CREBRFQ8IUR6 639 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 ZSWIM2Q8NEG5 633 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 GOLGA5Q8TBA6 731 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 SAAL1Q96ER3 474 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 SCLYQ96I15 445 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 PRIMPOLQ96LW4 560 aa21.2■□□□□ 0.98
USP39-218ENST00000493829 SRRTQ9BXP5 876 aaKnown RBP21.2■□□□□ 0.98
USP39-218ENST00000493829 AGO3Q9H9G7 860 aaKnown RBP21.2■□□□□ 0.98
USP39-218ENST00000493829 SAMSN1Q9NSI8 373 aaKnown RBP21.2■□□□□ 0.98
USP39-218ENST00000493829 GOLGA8IPA6NC78 632 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 GOLGA8JA6NMD2 632 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 SMTNL1A8MU46 457 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 PIGRP01833 764 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 RBL2Q08999 1139 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 PAK2Q13177 524 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 CEP135Q66GS9 1140 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 ZPBP2Q6X784 338 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 LRRC55Q6ZSA7 311 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 TNS4Q8IZW8 715 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 HAPLN2Q9GZV7 340 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 PDZD7Q9H5P4 517 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 AGPAT5Q9NUQ2 364 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 TBX21Q9UL17 535 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 ST3GAL5Q9UNP4 418 aa21.19■□□□□ 0.98
USP39-218ENST00000493829 PITPNM1O00562 1244 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 IKBKBO14920 756 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 ADAM9Q13443 819 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 EDRF1Q3B7T1 1238 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 TSHZ1Q6ZSZ6 1077 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 WNT8AQ9H1J5 351 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 HSPBP1Q9NZL4 362 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 TOM1L1O75674 476 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 SEZ6Q53EL9 994 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 MPZL3Q6UWV2 235 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 MSTO1Q9BUK6 570 aa21.18■□□□□ 0.98
USP39-218ENST00000493829 SCN5AQ14524 2016 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 CLDN3O15551 220 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 EXOC3O60645 756 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 CASP4P49662 377 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 FKBP3Q00688 224 aaKnown RBP21.17■□□□□ 0.98
USP39-218ENST00000493829 NCBP1Q09161 790 aaKnown RBP21.17■□□□□ 0.98
USP39-218ENST00000493829 NOLC1Q14978 699 aaKnown RBP eCLIP21.17■□□□□ 0.98
USP39-218ENST00000493829 RDH13Q8NBN7 331 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 CDT1Q9H211 546 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 HSD3B7Q9H2F3 369 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 ERVK-5Q9HDB9 667 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 PADI3Q9ULW8 664 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 TNFSF13BQ9Y275 285 aa21.17■□□□□ 0.98
USP39-218ENST00000493829 CETN3O15182 167 aa21.16■□□□□ 0.98
USP39-218ENST00000493829 GPR182O15218 404 aa21.16■□□□□ 0.98
USP39-218ENST00000493829 NBNO60934 754 aa21.16■□□□□ 0.98
USP39-218ENST00000493829 NPTXRO95502 500 aa21.16■□□□□ 0.98
USP39-218ENST00000493829 IBSPP21815 317 aaPredicted RBP21.16■□□□□ 0.98
USP39-218ENST00000493829 RPL13P26373 211 aaKnown RBP21.16■□□□□ 0.98
USP39-218ENST00000493829 HOXA11P31270 313 aaPredicted RBP21.16■□□□□ 0.98
USP39-218ENST00000493829 ZBTB41Q5SVQ8 909 aa21.16■□□□□ 0.98
USP39-218ENST00000493829 C7orf61Q8IZ16 206 aa21.16■□□□□ 0.98
USP39-218ENST00000493829 FAM213AQ9BRX8 229 aa21.16■□□□□ 0.98
USP39-218ENST00000493829 AGO2Q9UKV8 859 aaKnown RBP21.16■□□□□ 0.98
USP39-218ENST00000493829 TRIM43BA6NCK2 446 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 GOLGA6L3A6NEY3 463 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 ABLIM1O14639 778 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 N4BP3O15049 544 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 ATP1A3P13637 1013 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 PROZP22891 400 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 OSTNP61366 133 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 TPM4P67936 248 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 CCDC40Q4G0X9 1142 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 SLFN12LQ6IEE8 588 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 NOTUMQ6P988 496 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 CEP120Q8N960 986 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 TRIM43Q96BQ3 446 aaPredicted RBP21.15■□□□□ 0.98
USP39-218ENST00000493829 CNOT6LQ96LI5 555 aaKnown RBP21.15■□□□□ 0.98
USP39-218ENST00000493829 EIF2AQ9BY44 585 aaKnown RBP21.15■□□□□ 0.98
USP39-218ENST00000493829 IFIH1Q9BYX4 1025 aaKnown RBP21.15■□□□□ 0.98
USP39-218ENST00000493829 PTPRHQ9HD43 1115 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 CGNQ9P2M7 1197 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms