RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 CDHR5Q9HBB8 845 aa20.59■□□□□ 0.89
NECTIN3-211ENST00000493615 GTF2IRD1Q9UHL9 959 aa20.59■□□□□ 0.89
NECTIN3-211ENST00000493615 SIP14410 1827 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 FRMPD3Q5JV73 1810 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 GARTP22102 1010 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 GOLGA8FQ08AF8 430 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 GOLGA8DPQ0D2H9 430 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 KCNH2Q12809 1159 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 GDF6Q6KF10 455 aaPredicted RBP20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 TNS4Q8IZW8 715 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 PCSK9Q8NBP7 692 aaKnown RBP20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 NLRP7Q8WX94 980 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 ACO2Q99798 780 aaKnown RBP20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 TMEM106CQ9BVX2 250 aa20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 MRPL4Q9BYD3 311 aaKnown RBP20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 TRIP12Q14669 1992 aaPredicted RBP20.58■□□□□ 0.89
NECTIN3-211ENST00000493615 A0A1W2PQC6 194 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 GPR32O75388 356 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 ADRB2P07550 413 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 ACLYP53396 1101 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 SYCP1Q15431 976 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 DCAF17Q5H9S7 520 aaPredicted RBP20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 ZPBP2Q6X784 338 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 U2AF1L4Q8WU68 220 aaKnown RBP20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 TRIM44Q96DX7 344 aaPredicted RBP20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 FBXL18Q96ME1 805 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 ANKFY1Q9P2R3 1169 aa20.58■□□□□ 0.88
NECTIN3-211ENST00000493615 ACKR2O00590 384 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 TFRCP02786 760 aaKnown RBP20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 GNAT1P11488 350 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 SNRNP35Q16560 246 aaKnown RBP20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 AMHR2Q16671 573 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 FAM47CQ5HY64 1035 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 FKBP15Q5T1M5 1219 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 TCERG1LQ5VWI1 586 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 PLEKHO2Q8TD55 490 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 CACTINQ8WUQ7 758 aaKnown RBP20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 ABHD8Q96I13 439 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 ERGIC2Q96RQ1 377 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 KCNF1Q9H3M0 494 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 GINS2Q9Y248 185 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 ITIH6Q6UXX5 1313 aa20.57■□□□□ 0.88
NECTIN3-211ENST00000493615 A0A0B4J269 797 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 ABLIM1O14639 778 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 SGPL1O95470 568 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 DLG4P78352 724 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 ZNF410Q86VK4 478 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 SCLT1Q96NL6 688 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 SIK3Q9Y2K2 1263 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 KIAA0100Q14667 2235 aaKnown RBP20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 RNF225M0QZC1 329 aaPredicted RBP20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 TRIM49P0CI25 452 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 TRIM49CP0CI26 452 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 RBL2Q08999 1139 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 KCNMA1Q12791 1236 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 LRMPQ12912 555 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 BFSP1Q12934 665 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 PRPF4BQ13523 1007 aaKnown RBP20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 ZBTB41Q5SVQ8 909 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 CDR2LQ86X02 465 aaPredicted RBP20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 FAM213AQ9BRX8 229 aa20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 AGO2Q9UKV8 859 aaKnown RBP20.56■□□□□ 0.88
NECTIN3-211ENST00000493615 MAPK13O15264 365 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 TOM1L1O75674 476 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 AFPP02771 609 aaKnown RBP20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 GYPCP04921 128 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 FGFR4P22455 802 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 FAM187BQ17R55 369 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 C1orf220Q5T0J3 134 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 SLFN12LQ6IEE8 588 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 TSHZ1Q6ZSZ6 1077 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 GPD1LQ8N335 351 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 CPLX3Q8WVH0 158 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 WNT8BQ93098 351 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 CRACR2AQ9BSW2 395 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 PTPRHQ9HD43 1115 aa20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 PRMT7Q9NVM4 692 aaPredicted RBP20.55■□□□□ 0.88
NECTIN3-211ENST00000493615 CLDN3O15551 220 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 PROZP22891 400 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 GJA8P48165 433 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 ACOT2P49753 483 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 PPP2R3AQ06190 1150 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 SEZ6Q53EL9 994 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 HS1BP3Q53T59 392 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 ATF7IP2Q5U623 682 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 EEF1DP3Q658K8 133 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 CRELD2Q6UXH1 353 aaPredicted RBP20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 INTS8Q75QN2 995 aaKnown RBP20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 ZBTB33Q86T24 672 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 SESTD1Q86VW0 696 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 VTI1AQ96AJ9 217 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 OSMRQ99650 979 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 MSTO1Q9BUK6 570 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 EXTL3O43909 919 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 HARSP12081 509 aaKnown RBP20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 MATR3P43243 847 aaKnown RBP eCLIP20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 FXR1P51114 621 aaKnown RBP eCLIP20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 VAMP7P51809 220 aa20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 ADKP55263 362 aaKnown RBP20.54■□□□□ 0.88
NECTIN3-211ENST00000493615 ITGA7Q13683 1181 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms