RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 KMT5AQ9NQR1 393 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 PRKAG3Q9UGI9 489 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 KCNH3Q9ULD8 1083 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 ODF2LQ9ULJ1 636 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
CTSA-209ENST00000493522 MYMKA6NI61 221 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 SFI1A8K8P3 1242 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 DCXO43602 365 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 MGEA5O60502 916 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 PLS3P13797 630 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 CTNNB1P35222 781 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 POU5F1BQ06416 359 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 GIT2Q14161 759 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
CTSA-209ENST00000493522 CEP57L1Q8IYX8 460 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 FIBCD1Q8N539 461 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
CTSA-209ENST00000493522 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 TNMDQ9H2S6 317 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 CLDND1Q9NY35 253 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 RWDD3Q9Y3V2 267 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 ADGRA3Q8IWK6 1321 aa12.77□□□□□ -0.37
CTSA-209ENST00000493522 TRIOO75962 3097 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 K7ENM7 598 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 ENPP3O14638 875 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 SLC16A4O15374 487 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 TSPAN1O60635 241 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 PRKCBP05771 671 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 RB1P06400 928 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 IDEP14735 1019 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 SYKP43405 635 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 NPTX2P47972 431 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 NDUFA8P51970 172 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 ZP2Q05996 745 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 DSC3Q14574 896 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 COL19A1Q14993 1142 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 PCBP1Q15365 356 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTSA-209ENST00000493522 MAPK6Q16659 721 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 DDX12PQ92771 950 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 LRRC27Q9C0I9 530 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 GOLPH3LQ9H4A5 285 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 C17orf75Q9HAS0 396 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 PARVGQ9HBI0 331 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
CTSA-209ENST00000493522 DACT1Q9NYF0 836 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 LARSQ9P2J5 1176 aaKnown RBP12.76□□□□□ -0.37
CTSA-209ENST00000493522 SERTAD1Q9UHV2 236 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 LRFN2Q9ULH4 789 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 ANK1P16157 1881 aa12.76□□□□□ -0.37
CTSA-209ENST00000493522 C5orf67F2Z3F1 127 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 B4GALT5O43286 388 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
CTSA-209ENST00000493522 AFMP43652 599 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 SARSP49591 514 aaKnown RBP12.75□□□□□ -0.37
CTSA-209ENST00000493522 ZNF131P52739 623 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 EFNA5P52803 228 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 SMTNP53814 917 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 ASIC1P78348 528 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 AMPD3Q01432 767 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 NCBP1Q09161 790 aaKnown RBP12.75□□□□□ -0.37
CTSA-209ENST00000493522 FAM43BQ6ZT52 329 aaPredicted RBP12.75□□□□□ -0.37
CTSA-209ENST00000493522 RTN4RL1Q86UN2 441 aaPredicted RBP12.75□□□□□ -0.37
CTSA-209ENST00000493522 SFR1Q86XK3 245 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 NPAS4Q8IUM7 802 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 ADHFE1Q8IWW8 467 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 CPB2Q96IY4 423 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 PRIMPOLQ96LW4 560 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 LMAN2LQ9H0V9 348 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 CHST12Q9NRB3 414 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 RGS18Q9NS28 235 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 KBTBD4Q9NVX7 518 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 CNTNAP2Q9UHC6 1331 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 USP25Q9UHP3 1055 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 HPSEQ9Y251 543 aa12.75□□□□□ -0.37
CTSA-209ENST00000493522 FAM237AA0A1B0GTK4 181 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 C9IYK1 514 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 H0YCG3 227 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 STAG3L1P0CL83 205 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 GAP43P17677 238 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 ARF4P18085 180 aaPredicted RBP12.74□□□□□ -0.37
CTSA-209ENST00000493522 PRPF4BQ13523 1007 aaKnown RBP12.74□□□□□ -0.37
CTSA-209ENST00000493522 AMHR2Q16671 573 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 NOTUMQ6P988 496 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 SLC24A5Q71RS6 500 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 GRAMD1CQ8IYS0 662 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 SPIRE2Q8WWL2 714 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 DNAJC19Q96DA6 116 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 POP1Q99575 1024 aaKnown RBP12.74□□□□□ -0.37
CTSA-209ENST00000493522 TRIM9Q9C026 710 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 BLZF1Q9H2G9 400 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 ARHGAP28Q9P2N2 729 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms