RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
LSM2-214ENST00000493387 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 ABHD14A-ACY1A0A1B0GW23 586 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 BICDL2A1A5D9 508 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 PPP1R3GB7ZBB8 358 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 CLDN3O15551 220 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 CSF2RAP15509 400 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 BMP6P22004 513 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 GARTP22102 1010 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 HOXA11P31270 313 aaPredicted RBP12.65□□□□□ -0.38
LSM2-214ENST00000493387 RAB27AP51159 221 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 TYRO3Q06418 890 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 IKBKEQ14164 716 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 MYBPC2Q14324 1141 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 DSC3Q14574 896 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 ZSCAN23Q3MJ62 389 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 DCAF4L1Q3SXM0 396 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
LSM2-214ENST00000493387 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 MPZL3Q6UWV2 235 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 DEFB128Q7Z7B8 93 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 NELFCDQ8IXH7 590 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 SMYD4Q8IYR2 804 aaPredicted RBP12.65□□□□□ -0.38
LSM2-214ENST00000493387 GLIS3Q8NEA6 775 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 TCHPQ9BT92 498 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 TRAIPQ9BWF2 469 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 NAT10Q9H0A0 1025 aaKnown RBP12.65□□□□□ -0.38
LSM2-214ENST00000493387 KCTD10Q9H3F6 313 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 MAPK8IP1Q9UQF2 711 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 STYXL1Q9Y6J8 313 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 CENPFP49454 3210 aa12.65□□□□□ -0.38
LSM2-214ENST00000493387 SYCE3A1L190 88 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 B4GALT5O43286 388 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 BAIAP3O94812 1187 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 CAVIN2O95810 425 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 MCF2P10911 925 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 SYN1P17600 705 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 PROZP22891 400 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 CCNE1P24864 410 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 RPL13P26373 211 aaKnown RBP12.64□□□□□ -0.39
LSM2-214ENST00000493387 ERCC5P28715 1186 aaPredicted RBP12.64□□□□□ -0.39
LSM2-214ENST00000493387 HOXD13P35453 343 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 MATR3P43243 847 aaKnown RBP eCLIP12.64□□□□□ -0.39
LSM2-214ENST00000493387 LRRC63Q05C16 580 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 MCL1Q07820 350 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 KCNA1Q09470 495 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 PAK1Q13153 545 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 NFIL3Q16649 462 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 SLC27A1Q6PCB7 646 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 PSRC1Q6PGN9 363 aaPredicted RBP12.64□□□□□ -0.39
LSM2-214ENST00000493387 C12orf56Q8IXR9 622 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 HACE1Q8IYU2 909 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 TMEM174Q8WUU8 243 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 P2RX5Q93086 422 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 CPB2Q96IY4 423 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 ADAM2Q99965 735 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 TRIM6Q9C030 488 aaPredicted RBP12.64□□□□□ -0.39
LSM2-214ENST00000493387 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
LSM2-214ENST00000493387 TMX1Q9H3N1 280 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 PDZD7Q9H5P4 517 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 PTPRHQ9HD43 1115 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 RGS18Q9NS28 235 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 TRAF3IP3Q9Y228 551 aa12.64□□□□□ -0.39
LSM2-214ENST00000493387 A0A0B4J269 797 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 TGFB1I1O43294 461 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 ZNF623O75123 536 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 FGFR1OPO95684 399 aaKnown RBP12.63□□□□□ -0.39
LSM2-214ENST00000493387 LDHAP00338 332 aaKnown RBP12.63□□□□□ -0.39
LSM2-214ENST00000493387 FGBP02675 491 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 POU5F1Q01860 360 aaKnown RBP12.63□□□□□ -0.39
LSM2-214ENST00000493387 NOLC1Q14978 699 aaKnown RBP eCLIP12.63□□□□□ -0.391e-7■□□□□ 11
LSM2-214ENST00000493387 DPCR1Q3MIW9 517 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 ZNF568Q3ZCX4 644 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 KLHL10Q6JEL2 608 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 SLC24A5Q71RS6 500 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 SLC9A9Q8IVB4 645 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 NELFBQ8WX92 580 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 POMGNT1Q8WZA1 660 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 MTIF3Q9H2K0 278 aaKnown RBP12.63□□□□□ -0.39
LSM2-214ENST00000493387 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 AGPAT3Q9NRZ7 376 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 RWDD2AQ9UIY3 292 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 TANC1Q9C0D5 1861 aa12.63□□□□□ -0.39
LSM2-214ENST00000493387 ZMYM2Q9UBW7 1377 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 A0A0U1RQF3 1178 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 ANKRD63C9JTQ0 380 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 ENPP3O14638 875 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 OGTO15294 1046 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 EOMESO95936 686 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 EDN1P05305 212 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
LSM2-214ENST00000493387 FAM189BP81408 668 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 FKBP3Q00688 224 aaKnown RBP12.62□□□□□ -0.39
LSM2-214ENST00000493387 EEF1DP3Q658K8 133 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 SLC39A4Q6P5W5 647 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms