RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 DEXIO95424 95 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 TDP2O95551 362 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 CFHP08603 1231 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 HOXA11P31270 313 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 HSPA4P34932 840 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 POU5F1BQ06416 359 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 DSC1Q08554 894 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 UBXN11Q5T124 520 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 NOTUMQ6P988 496 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 CPLX2Q6PUV4 134 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 C4orf19Q8IY42 314 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 COLGALT2Q8IYK4 626 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 BLIDQ8IZY5 108 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 SLC44A3Q8N4M1 653 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 KCNG4Q8TDN1 519 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 PRPF31Q8WWY3 499 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 SMG7Q92540 1137 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 SHDQ96IW2 340 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 CEP170P1Q96L14 293 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 SH2D3AQ9BRG2 576 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 COLEC11Q9BWP8 271 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 PIDD1Q9HB75 910 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 SLC2A4RGQ9NR83 387 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 CHST7Q9NS84 486 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 FNIP2Q9P278 1114 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 DDX25Q9UHL0 483 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 M0R2N6 131 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 C2CD2LO14523 706 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 N4BP1O75113 896 aaKnown RBP12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 SRGAP2CP0DJJ0 459 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 PDIA3P30101 505 aaKnown RBP12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 OR1G1P47890 313 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 SSRP1Q08945 709 aaKnown RBP12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 LAMTOR4Q0VGL1 99 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 TFDP1Q14186 410 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 USP41Q3LFD5 358 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 PLA2G4FQ68DD2 849 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 FERMT3Q86UX7 667 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 GJA10Q969M2 543 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 TBC1D17Q9HA65 648 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 ARHGEF3Q9NR81 526 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 PRG3Q9Y2Y8 225 aaPredicted RBP12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 SIT1Q9Y3P8 196 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 IPPQ9Y573 584 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 SNX14Q9Y5W7 946 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 C2orf16Q68DN1 1984 aa12.27□□□□□ -0.45
SNRNP200-207ENST00000493271 ARL5CA6NH57 179 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 CPLX1O14810 134 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 NARSO43776 548 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 LAMP2P13473 410 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 CPA1P15085 419 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 AFF1P51825 1210 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 NPEPPSP55786 919 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 PUM1Q14671 1186 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 EPHA7Q15375 998 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 RNF149Q8NC42 400 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 SMG8Q8ND04 991 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 RUBCNQ92622 972 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 ZNF707Q96C28 371 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 MYADMQ96S97 322 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 MTRQ99707 1265 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 NFKBIZQ9BYH8 718 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 PRKD2Q9BZL6 878 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 TRIM6Q9C030 488 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 NT5C3AQ9H0P0 336 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 CSRNP2Q9H175 543 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 ZSWIM4Q9H7M6 989 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 MINDY3Q9H8M7 445 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 KCNMB3Q9NPA1 279 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 VAV3Q9UKW4 847 aa12.26□□□□□ -0.45
SNRNP200-207ENST00000493271 ANHXE9PGG2 379 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 TGM5O43548 720 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 TSPAN1O60635 241 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 XBP1P17861 261 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 YWHABP31946 246 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 MLH1P40692 756 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 MAGEA9P43362 315 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 STARD6P59095 220 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 PTENP60484 403 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 CCT2P78371 535 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 EMC2Q15006 297 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 DCLRE1AQ6PJP8 1040 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 MTSS1LQ765P7 747 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
SNRNP200-207ENST00000493271 NEK8Q86SG6 692 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms