RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PLEKHO2Q8TD55 490 aa15.25■□□□□ 0.03
PTPN7-216ENST00000492977 PARD3BQ8TEW8 1205 aa15.25■□□□□ 0.03
PTPN7-216ENST00000492977 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
PTPN7-216ENST00000492977 PTPN18Q99952 460 aa15.25■□□□□ 0.03
PTPN7-216ENST00000492977 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.25■□□□□ 0.03
PTPN7-216ENST00000492977 CARD6Q9BX69 1037 aa15.25■□□□□ 0.03
PTPN7-216ENST00000492977 PDGFCQ9NRA1 345 aa15.25■□□□□ 0.03
PTPN7-216ENST00000492977 AJAP1Q9UKB5 411 aaPredicted RBP15.25■□□□□ 0.03
PTPN7-216ENST00000492977 DUSP10Q9Y6W6 482 aa15.25■□□□□ 0.03
PTPN7-216ENST00000492977 IGKV6-21A0A0C4DH24 114 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ANO9A1A5B4 782 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 F8VZ95 297 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ADCY3O60266 1144 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 HBP1O60381 514 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 TACC1O75410 805 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 MAPK4P31152 587 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 GCLMP48507 274 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 MXI1P50539 228 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 CYP24A1Q07973 514 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 GRB14Q14449 540 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 MXD4Q14582 209 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-216ENST00000492977 DRAP1Q14919 205 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-216ENST00000492977 PLCB4Q15147 1175 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 GJB7Q6PEY0 223 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ZNF571Q7Z3V5 609 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-216ENST00000492977 GPR142Q7Z601 462 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 GPIHBP1Q8IV16 184 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 TRIM58Q8NG06 486 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 COPS5Q92905 334 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 TMEM117Q9H0C3 514 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ADAMTS1Q9UHI8 967 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 SIP14410 1827 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ATP8B3O60423 1300 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 A0A087X0T9 212 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 MACROD2A1Z1Q3 448 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ZNF233A6NK53 670 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ZBTB42B2RXF5 422 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 EXTL3O43909 919 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 TADA3O75528 432 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 GH1P01241 217 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 FAM228BP0C875 321 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 EFNA5P52803 228 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ARHGAP1Q07960 439 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 KRT39Q6A163 491 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 PHLDB3Q6NSJ2 640 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 MTERF4Q7Z6M4 381 aaKnown RBP15.24■□□□□ 0.03
PTPN7-216ENST00000492977 PLEKHH3Q7Z736 793 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 DPP9Q86TI2 863 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 EFCAB3Q8N7B9 438 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 CEP112Q8N8E3 955 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 PRPF31Q8WWY3 499 aaKnown RBP15.24■□□□□ 0.03
PTPN7-216ENST00000492977 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-216ENST00000492977 TMEM8AQ9HCN3 771 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-216ENST00000492977 COQ4Q9Y3A0 265 aa15.24■□□□□ 0.03
PTPN7-216ENST00000492977 SLC15A5A6NIM6 579 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 LRRIQ3A6PVS8 624 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 ITGBL1O95965 494 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 LDHAP00338 332 aaKnown RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 MARK3P27448 753 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 TUBB4BP68371 445 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 AMPD2Q01433 879 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 CAPSQ13938 189 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 BMS1Q14692 1282 aaKnown RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 NAA30Q147X3 362 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 ENOX2Q16206 610 aaKnown RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 WHAMMP3Q1A5X7 153 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 PAPD7Q5XG87 772 aaKnown RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 TRIM50Q86XT4 487 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 PSPC1Q8WXF1 523 aaKnown RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 ZCCHC17Q9NP64 241 aaKnown RBP15.23■□□□□ 0.03
PTPN7-216ENST00000492977 ERAP1Q9NZ08 941 aa15.23■□□□□ 0.03
PTPN7-216ENST00000492977 BTNL10A8MVZ5 291 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 MAP3K13O43283 966 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 EVI5O60447 810 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 HUNKP57058 714 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 NAB2Q15742 525 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 TRAPPC11Q7Z392 1133 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 LRRN4CLQ8ND94 238 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 PPTC7Q8NI37 304 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 UBXN4Q92575 508 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 CCDC127Q96BQ5 260 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 ALS2CR12Q96Q35 445 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 FAM213AQ9BRX8 229 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 GPR88Q9GZN0 384 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 KATNBL1Q9H079 304 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 SLC5A4Q9NY91 659 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
PTPN7-216ENST00000492977 JRKLQ9Y4A0 524 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 TRPM7Q96QT4 1865 aa15.22■□□□□ 0.03
PTPN7-216ENST00000492977 SNAI1O95863 264 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-216ENST00000492977 GPC3P51654 580 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 CLDN10P78369 228 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 RBM10P98175 930 aaKnown RBP15.21■□□□□ 0.03
PTPN7-216ENST00000492977 LAMTOR4Q0VGL1 99 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 PSMD6Q15008 389 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 ERCC6LQ2NKX8 1250 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 ZNF484Q5JVG2 852 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 TMEM63BQ5T3F8 832 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms