RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 UBXN11Q5T124 520 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 COLGALT2Q8IYK4 626 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 SLC44A3Q8N4M1 653 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 DAGLBQ8NCG7 672 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 TCP11Q8WWU5 503 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 PRPF31Q8WWY3 499 aaKnown RBP12.3□□□□□ -0.44
SND1-215ENST00000492772 RSAD2Q8WXG1 361 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 KCNB2Q92953 911 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 CCDC51Q96ER9 411 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 PLEKHA4Q9H4M7 779 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 DHX33Q9H6R0 707 aaKnown RBP12.3□□□□□ -0.44
SND1-215ENST00000492772 ARHGEF3Q9NR81 526 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.3□□□□□ -0.44
SND1-215ENST00000492772 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.3□□□□□ -0.44
SND1-215ENST00000492772 DDX25Q9UHL0 483 aaKnown RBP12.3□□□□□ -0.44
SND1-215ENST00000492772 CA14Q9ULX7 337 aa12.3□□□□□ -0.44
SND1-215ENST00000492772 ARL5CA6NH57 179 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 ASAP2O43150 1006 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 RFPL2O75678 378 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 EFEMP2O95967 443 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 SRGAP2CP0DJJ0 459 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 AXLP30530 894 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 NPEPPSP55786 919 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 DSG1Q02413 1049 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 DSC1Q08554 894 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 LAMTOR4Q0VGL1 99 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 KIAA0319Q5VV43 1072 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 NOTUMQ6P988 496 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 GPR65Q8IYL9 337 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 HACE1Q8IYU2 909 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 BLIDQ8IZY5 108 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 SMG8Q8ND04 991 aaKnown RBP12.29□□□□□ -0.44
SND1-215ENST00000492772 ZNF707Q96C28 371 aaPredicted RBP12.29□□□□□ -0.44
SND1-215ENST00000492772 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 MYADMQ96S97 322 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 MINDY3Q9H8M7 445 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 PIDD1Q9HB75 910 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 IPPQ9Y573 584 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 SNX14Q9Y5W7 946 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 R4GN57 208 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 MIA3Q5JRA6 1907 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 ZMYM2Q9UBW7 1377 aa12.29□□□□□ -0.44
SND1-215ENST00000492772 EP300Q09472 2414 aaPredicted RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 M0R2N6 131 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 DEXIO95424 95 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 PSMA5P28066 241 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 HSPA4P34932 840 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 MLH1P40692 756 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 EVCP57679 992 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 HTR4Q13639 388 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 EMC2Q15006 297 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 GET4Q7L5D6 327 aaPredicted RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 TAS1R1Q7RTX1 841 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 RNF149Q8NC42 400 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 GPR152Q8TDT2 470 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 RIN2Q8WYP3 895 aaPredicted RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 TMEM143Q96AN5 459 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 RMDN1Q96DB5 314 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 HINFPQ9BQA5 517 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 LXNQ9BS40 222 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 COLEC11Q9BWP8 271 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 SLKQ9H2G2 1235 aaPredicted RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 NCOA5Q9HCD5 579 aaKnown RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 SLC2A4RGQ9NR83 387 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 SIT1Q9Y3P8 196 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 ZFP37Q9Y6Q3 630 aaPredicted RBP12.28□□□□□ -0.44
SND1-215ENST00000492772 MYH15Q9Y2K3 1946 aa12.28□□□□□ -0.44
SND1-215ENST00000492772 ANHXE9PGG2 379 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 EML1O00423 815 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 TGM5O43548 720 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 SLC37A4O43826 429 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 TSPAN1O60635 241 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 LAMP2P13473 410 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.45
SND1-215ENST00000492772 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
SND1-215ENST00000492772 SCNN1GP51170 649 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 CCT2P78371 535 aaKnown RBP12.27□□□□□ -0.45
SND1-215ENST00000492772 NCBP1Q09161 790 aaKnown RBP12.27□□□□□ -0.45
SND1-215ENST00000492772 INF2Q27J81 1249 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 USP41Q3LFD5 358 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 SPECC1Q5M775 1068 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 FUT10Q6P4F1 479 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 DCLRE1AQ6PJP8 1040 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 OTUD6AQ7L8S5 288 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 DGLUCYQ7Z3D6 616 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 FERMT3Q86UX7 667 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 C1orf210Q8IVY1 113 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 C4orf19Q8IY42 314 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 KIAA2013Q8IYS2 634 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
SND1-215ENST00000492772 RUBCNQ92622 972 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms