RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 SIX2Q9NPC8 291 aa16.43■□□□□ 0.22
TMEM50A-205ENST00000491936 ADGRA2Q96PE1 1338 aa16.43■□□□□ 0.22
TMEM50A-205ENST00000491936 COL1A2P08123 1366 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 ANKRD63C9JTQ0 380 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 HNRNPDLO14979 420 aaKnown RBP16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 MAGEB2O15479 319 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 PJA2O43164 708 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 SLU7O95391 586 aaKnown RBP16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 ADSSP30520 456 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 LIG4P49917 911 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 JAM2P57087 298 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 TUBB4BP68371 445 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 ARHGAP1Q07960 439 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 RAPGEF1Q13905 1077 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 TFDP1Q14186 410 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 SNRNP35Q16560 246 aaKnown RBP16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 ZPBP2Q6X784 338 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 ASAP3Q8TDY4 903 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 PSPC1Q8WXF1 523 aaKnown RBP16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 POMGNT1Q8WZA1 660 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 JAKMIP2Q96AA8 810 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 TMEM143Q96AN5 459 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 INTS2Q9H0H0 1204 aaKnown RBP16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 PCDHA13Q9Y5I0 950 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 WDR81Q562E7 1941 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 ZNF236Q9UL36 1845 aa16.42■□□□□ 0.22
TMEM50A-205ENST00000491936 MYH9P35579 1960 aaKnown RBP16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 ZNF233A6NK53 670 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 EXTL3O43909 919 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 SNAI1O95863 264 aaPredicted RBP16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 RGS19P49795 217 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 PKN2Q16513 984 aaKnown RBP16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 DUSP28Q4G0W2 176 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 IRF2BP2Q7Z5L9 587 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 VPS36Q86VN1 386 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 BICD1Q96G01 975 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 TINF2Q9BSI4 451 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 TMEM8AQ9HCN3 771 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 APEX2Q9UBZ4 518 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 COQ4Q9Y3A0 265 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 ADGRA3Q8IWK6 1321 aa16.41■□□□□ 0.22
TMEM50A-205ENST00000491936 CTAGE9A4FU28 777 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 LRRIQ4A6NIV6 560 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 TLR2O60603 784 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 ZC3H11AO75152 810 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 HOXD8P13378 290 aaPredicted RBP16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 MAGEA1P43355 309 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 SOX10P56693 466 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 CLDN10P78369 228 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 CAP1Q01518 475 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 MAP2K5Q13163 448 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 SLC18A3Q16572 532 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 CBWD6Q4V339 395 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 EPC2Q52LR7 807 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 CBWD3Q5JTY5 395 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 ZNF569Q5MCW4 686 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 CBWD5Q5RIA9 395 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 MORN1Q5T089 497 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 CDCA2Q69YH5 1023 aaPredicted RBP16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 KRT39Q6A163 491 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 SLC39A4Q6P5W5 647 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 TAS1R3Q7RTX0 852 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 ZBTB8OSQ8IWT0 167 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 RNF10Q8N5U6 811 aaKnown RBP16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 RDH13Q8NBN7 331 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 LMO3Q8TAP4 145 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 PARD3BQ8TEW8 1205 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 WDR24Q96S15 920 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 KIFC3Q9BVG8 833 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 NFKBIZQ9BYH8 718 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 IFIH1Q9BYX4 1025 aaKnown RBP16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 FHOD1Q9Y613 1164 aa16.4■□□□□ 0.22
TMEM50A-205ENST00000491936 ZNFX1Q9P2E3 1918 aaKnown RBP16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 ZBTB42B2RXF5 422 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 URI1O94763 535 aaPredicted RBP16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 TRIM49P0CI25 452 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 TRIM49CP0CI26 452 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 ACTN1P12814 892 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 SOX5P35711 763 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 MXI1P50539 228 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 CYP24A1Q07973 514 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 ACVR2BQ13705 512 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 PSMD6Q15008 389 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 C1orf220Q5T0J3 134 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 IQCEQ6IPM2 695 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 FBXO46Q6PJ61 603 aaPredicted RBP16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 PRPF31Q8WWY3 499 aaKnown RBP16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 NAPGQ99747 312 aaPredicted RBP16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 DNAJC12Q9UKB3 198 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 ZNF215Q9UL58 517 aaPredicted RBP16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
TMEM50A-205ENST00000491936 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
TMEM50A-205ENST00000491936 A0A0B4J269 797 aa16.38■□□□□ 0.21
TMEM50A-205ENST00000491936 BTNL10A8MVZ5 291 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms