RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 CSDE1O75534 798 aaKnown RBP13.2□□□□□ -0.3
C3orf49-202ENST00000491896 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
C3orf49-202ENST00000491896 FGFR1P11362 822 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 MARCKSP29966 332 aaPredicted RBP13.2□□□□□ -0.3
C3orf49-202ENST00000491896 DDIT3P35638 169 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 PLCB3Q01970 1234 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 GRIN1Q05586 938 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 PRPF4BQ13523 1007 aaKnown RBP13.2□□□□□ -0.3
C3orf49-202ENST00000491896 KARSQ15046 597 aaKnown RBP13.2□□□□□ -0.3
C3orf49-202ENST00000491896 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 FAM173BQ6P4H8 233 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 URGCPQ8TCY9 931 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 PPP2R3CQ969Q6 453 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 ZNF558Q96NG5 402 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 TRIM6Q9C030 488 aaPredicted RBP13.2□□□□□ -0.3
C3orf49-202ENST00000491896 TNMDQ9H2S6 317 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 KMT5AQ9NQR1 393 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 IPPQ9Y573 584 aa13.2□□□□□ -0.3
C3orf49-202ENST00000491896 PRRC2BQ5JSZ5 2229 aaKnown RBP13.2□□□□□ -0.3
C3orf49-202ENST00000491896 K7ERI5 159 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 NCKAP1LP55160 1127 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 KRT85P78386 507 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 NUCB2P80303 420 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 GPM6BQ13491 265 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 ALCAMQ13740 583 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 COL19A1Q14993 1142 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 COLGALT1Q8NBJ5 622 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 GDPD5Q8WTR4 605 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 HVCN1Q96D96 273 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 EPSTI1Q96J88 318 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 TMEM175Q9BSA9 504 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
C3orf49-202ENST00000491896 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
C3orf49-202ENST00000491896 CWH43Q9H720 699 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 COG5Q9UP83 839 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 TNFSF13BQ9Y275 285 aa13.19□□□□□ -0.3
C3orf49-202ENST00000491896 PRUNE2Q8WUY3 3088 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
C3orf49-202ENST00000491896 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
C3orf49-202ENST00000491896 GAP43P17677 238 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 STAT6P42226 847 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 PEX3P56589 373 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 STRN3Q13033 797 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
C3orf49-202ENST00000491896 KYAT1Q16773 422 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 MAEAQ7L5Y9 396 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
C3orf49-202ENST00000491896 TMEM161BQ8NDZ6 487 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 PDZD7Q9H5P4 517 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 TYW1Q9NV66 732 aaKnown RBP13.18□□□□□ -0.3
C3orf49-202ENST00000491896 RCOR1Q9UKL0 485 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 PLAGL2Q9UPG8 496 aa13.18□□□□□ -0.3
C3orf49-202ENST00000491896 UNC80Q8N2C7 3258 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 A0A087WWV3 80 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 FRMD3A2A2Y4 597 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 B4GALT5O43286 388 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 OFD1O75665 1012 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 TOM1L1O75674 476 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 PIGRP01833 764 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 ITGA4P13612 1032 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 IGFBP4P22692 258 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 PROZP22891 400 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 ALDH7A1P49419 539 aaKnown RBP13.17□□□□□ -0.3
C3orf49-202ENST00000491896 AMPD3Q01432 767 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
C3orf49-202ENST00000491896 GRIK3Q13003 919 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 PKP1Q13835 747 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 GIT2Q14161 759 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 PAN2Q504Q3 1202 aaKnown RBP13.17□□□□□ -0.3
C3orf49-202ENST00000491896 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
C3orf49-202ENST00000491896 ATF7IP2Q5U623 682 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 KCNT2Q6UVM3 1135 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 SV2BQ7L1I2 683 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 IQUBQ8NA54 791 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 EIF2AQ9BY44 585 aaKnown RBP13.17□□□□□ -0.3
C3orf49-202ENST00000491896 NSUN3Q9H649 340 aaKnown RBP13.17□□□□□ -0.3
C3orf49-202ENST00000491896 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
C3orf49-202ENST00000491896 TBC1D13Q9NVG8 400 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 USP25Q9UHP3 1055 aa13.17□□□□□ -0.3
C3orf49-202ENST00000491896 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
C3orf49-202ENST00000491896 CCDC169A6NNP5 214 aa13.16□□□□□ -0.3
C3orf49-202ENST00000491896 FGF18O76093 207 aa13.16□□□□□ -0.3
C3orf49-202ENST00000491896 FAM13AO94988 1023 aa13.16□□□□□ -0.3
C3orf49-202ENST00000491896 ITGB1P05556 798 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms