RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ZBTB8OSQ8IWT0 167 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 GPR65Q8IYL9 337 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 UBALD2Q8IYN6 164 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 PLCD3Q8N3E9 789 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 FAM184AQ8NB25 1140 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 LPPQ93052 612 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 C8orf76Q96K31 380 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 RPGRIP1Q96KN7 1286 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 MTMR9Q96QG7 549 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 NACC1Q96RE7 527 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 RAB34Q9BZG1 259 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 GBP3Q9H0R5 595 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 CSRNP2Q9H175 543 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 SFXN1Q9H9B4 322 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 MRPL17Q9NRX2 175 aaKnown RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 GJB4Q9NTQ9 266 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 NOL7Q9UMY1 257 aaKnown RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 USTQ9Y2C2 406 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 GIT1Q9Y2X7 761 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 PLXNA3P51805 1871 aa9.71□□□□□ -0.85
NUP50-217ENST00000491860 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 NT5C1B-RDH14C9J2C7 533 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 TSPAN1O60635 241 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 LARGE1O95461 756 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 URODP06132 367 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
NUP50-217ENST00000491860 PPP2R5AQ15172 486 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 PTPN21Q16825 1174 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 KIAA1841Q6NSI8 718 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 SLC27A1Q6PCB7 646 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 PPP4R3CPQ6ZMV5 832 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 APBB1IPQ7Z5R6 666 aaPredicted RBP9.71□□□□□ -0.86
NUP50-217ENST00000491860 ZBTB33Q86T24 672 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 CABP7Q86V35 215 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 ZNF579Q8NAF0 562 aaKnown RBP9.71□□□□□ -0.86
NUP50-217ENST00000491860 ACSF2Q96CM8 615 aaPredicted RBP9.71□□□□□ -0.86
NUP50-217ENST00000491860 POLR3CQ9BUI4 534 aaPredicted RBP9.71□□□□□ -0.86
NUP50-217ENST00000491860 COLEC11Q9BWP8 271 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 RHOBTB2Q9BYZ6 727 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 MINDY3Q9H8M7 445 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 XPNPEP1Q9NQW7 623 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 PRMT7Q9NVM4 692 aaPredicted RBP9.71□□□□□ -0.86
NUP50-217ENST00000491860 IPPQ9Y573 584 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 TDRD15B5MCY1 1934 aaKnown RBP9.71□□□□□ -0.86
NUP50-217ENST00000491860 PHLPP2Q6ZVD8 1323 aa9.71□□□□□ -0.86
NUP50-217ENST00000491860 ARL5CA6NH57 179 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 LAD1O00515 517 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 NRP1O14786 923 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 JAK2O60674 1132 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 SOD2P04179 222 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 ADH1AP07327 375 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 KLRC2P26717 231 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 RPA1P27694 616 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 SLC11A1P49279 550 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 MBTD1Q05BQ5 628 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 MTMR3Q13615 1198 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 CAPSQ13938 189 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 PTPN14Q15678 1187 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 FAM187BQ17R55 369 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 UBXN11Q5T124 520 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 C15orf39Q6ZRI6 1047 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 HDAC7Q8WUI4 952 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 ASIC4Q96FT7 647 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 RPS6KC1Q96S38 1066 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 ADPGKQ9BRR6 497 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 HERC2P3Q9BVR0 1158 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.7□□□□□ -0.86
NUP50-217ENST00000491860 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
NUP50-217ENST00000491860 DNAJB4Q9UDY4 337 aa9.7□□□□□ -0.86
NUP50-217ENST00000491860 A0A1B0GUA9 196 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 ARHGEF35A5YM69 484 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 FAM205CA6NFA0 338 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 LRRIQ4A6NIV6 560 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 MEIS3P2A8K0S8 358 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 N4BP3O15049 544 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 USO1O60763 962 aaKnown RBP9.69□□□□□ -0.86
NUP50-217ENST00000491860 CACNA1HO95180 2353 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 POMCP01189 267 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 ARF4P18085 180 aaPredicted RBP9.69□□□□□ -0.86
NUP50-217ENST00000491860 ATP2B1P20020 1258 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 GLRA2P23416 452 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 AVPR2P30518 371 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 MCM7P33993 719 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 OR1G1P47890 313 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 EFNA5P52803 228 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 RBM10P98175 930 aaKnown RBP9.69□□□□□ -0.86
NUP50-217ENST00000491860 GRIK3Q13003 919 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 PDIA5Q14554 519 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 MAPK6Q16659 721 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 LONRF3Q496Y0 759 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 CDCA2Q69YH5 1023 aaPredicted RBP9.69□□□□□ -0.86
NUP50-217ENST00000491860 PDXDC1Q6P996 788 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 CATSPER3Q86XQ3 398 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 ZNF280BQ86YH2 543 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 NOSTRINQ8IVI9 506 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 CCDC83Q8IWF9 413 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 COLGALT2Q8IYK4 626 aa9.69□□□□□ -0.86
NUP50-217ENST00000491860 ZDHHC14Q8IZN3 488 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms