RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PSPC1Q8WXF1 523 aaKnown RBP10.33□□□□□ -0.76
BRCA1-219ENST00000491747 SCLT1Q96NL6 688 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 RAD9AQ99638 391 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 ADAM2Q99965 735 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 FTHL17Q9BXU8 183 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 GCOM2Q9BZD3 368 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-219ENST00000491747 BHMT2Q9H2M3 363 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 SLC28A3Q9HAS3 691 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 RGS18Q9NS28 235 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 GAS2O43903 313 aaKnown RBP10.33□□□□□ -0.76
BRCA1-219ENST00000491747 CAPSQ13938 189 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 VSTM4Q8IW00 320 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 CLIC6Q96NY7 704 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 CSRNP2Q9H175 543 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 POLR3FQ9H1D9 316 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-219ENST00000491747 HSD3B7Q9H2F3 369 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 CERS4Q9HA82 394 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 CALCOCO1Q9P1Z2 691 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 MYH11P35749 1972 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 TMEM265A0A087WTH1 108 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 ARHGEF35A5YM69 484 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 EPOPA6NHQ4 379 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 C9IYK1 514 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 ATP8B1O43520 1251 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 URI1O94763 535 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 SLC34A2O95436 690 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 EYA4O95677 639 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 BMP15O95972 392 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 CYP11B2P19099 503 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 CDC42EP1Q00587 391 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 TEX35Q5T0J7 233 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 ISM2Q6H9L7 571 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 TRIM65Q6PJ69 517 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 CABP7Q86V35 215 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 RNF149Q8NC42 400 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 LRRN4CLQ8ND94 238 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 BSNDQ8WZ55 320 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 CCDC43Q96MW1 224 aaKnown RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 CDX2Q99626 313 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 RC3H2Q9HBD1 1191 aaKnown RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 HOOK1Q9UJC3 728 aaKnown RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 RALGAPA2Q2PPJ7 1873 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 LINC01553A4QN01 128 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 RFXAPO00287 272 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 ASAP2O43150 1006 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 ZRANB2O95218 330 aaKnown RBP eCLIP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 GATMP50440 423 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 TMEM119Q4V9L6 283 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 SP7Q8TDD2 431 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 MYLIPQ8WY64 445 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 ZNF689Q96CS4 500 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 EPSTI1Q96J88 318 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 PRDM12Q9H4Q4 367 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 DNM3Q9UQ16 869 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 INSL6Q9Y581 213 aa10.32□□□□□ -0.76
BRCA1-219ENST00000491747 SRPRBQ9Y5M8 271 aaKnown RBP10.32□□□□□ -0.76
BRCA1-219ENST00000491747 DENND3A2RUS2 1198 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 TADA3O75528 432 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 DGKIO75912 1065 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 LONP1P36776 959 aaKnown RBP10.31□□□□□ -0.76
BRCA1-219ENST00000491747 SARSP49591 514 aaKnown RBP10.31□□□□□ -0.76
BRCA1-219ENST00000491747 PTENP60484 403 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 FAM189BP81408 668 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 MXD4Q14582 209 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-219ENST00000491747 KARSQ15046 597 aaKnown RBP10.31□□□□□ -0.76
BRCA1-219ENST00000491747 ODR4Q5SWX8 454 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 FAM102BQ5T8I3 360 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 SHC4Q6S5L8 630 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 AK8Q96MA6 479 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 RUSC1Q9BVN2 902 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 ST7Q9NRC1 585 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 EYSQ5T1H1 3165 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 TRANK1O15050 2925 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 ERICH4A6NGS2 130 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 CUTAO60888 179 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 LINC00271P0C7V0 271 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 PNOCQ13519 176 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 RESP18Q5W5W9 173 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 RINT1Q6NUQ1 792 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 C1orf186Q6ZWK4 172 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 SLC24A5Q71RS6 500 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 SRGAP1Q7Z6B7 1085 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 NPAS4Q8IUM7 802 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 REXO1L1PQ8IX06 675 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 CNNM3Q8NE01 707 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 MCPH1Q8NEM0 835 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 YME1L1Q96TA2 773 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 BLOC1S4Q9NUP1 217 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 REV3LO60673 3130 aa10.31□□□□□ -0.76
BRCA1-219ENST00000491747 ATG2AQ2TAZ0 1938 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 STX10O60499 249 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 HOXA11P31270 313 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 SLC12A3P55017 1021 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 MBTD1Q05BQ5 628 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 CATSPER4Q7RTX7 472 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms