RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 POLR3FQ9H1D9 316 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-220ENST00000491319 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
SMPD4-220ENST00000491319 DZANK1Q9NVP4 752 aa17.47■□□□□ 0.39
SMPD4-220ENST00000491319 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
SMPD4-220ENST00000491319 C2CD4DB7Z1M9 353 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 NRP1O14786 923 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 B4GALT5O43286 388 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 ARF4P18085 180 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-220ENST00000491319 AXLP30530 894 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 SIGLEC14Q08ET2 396 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 PCBP1Q15365 356 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMPD4-220ENST00000491319 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 CNNM3Q8NE01 707 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 CCDC51Q96ER9 411 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 ZFP42Q96MM3 310 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 NECTIN4Q96NY8 510 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 GAD1Q99259 594 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 APOL6Q9BWW8 343 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 CSRNP2Q9H175 543 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 KCNH6Q9H252 994 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 NXF3Q9H4D5 531 aaKnown RBP17.46■□□□□ 0.39
SMPD4-220ENST00000491319 MARCH5Q9NX47 278 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 PRG3Q9Y2Y8 225 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-220ENST00000491319 NR2E1Q9Y466 385 aa17.46■□□□□ 0.39
SMPD4-220ENST00000491319 DOCK8Q8NF50 2099 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 ARL5CA6NH57 179 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 ALDH2P05091 517 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 SPATA31C1P0DKV0 1188 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 MTHFRP42898 656 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 SCNN1GP51170 649 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 NHLH1Q02575 133 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 POU5F1BQ06416 359 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 KIAA1841Q6NSI8 718 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 MAEAQ7L5Y9 396 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 ZBTB33Q86T24 672 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 CDR2LQ86X02 465 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-220ENST00000491319 COLGALT2Q8IYK4 626 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 ASIC4Q96FT7 647 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 RIPOR3Q96MK2 946 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 NFKBIZQ9BYH8 718 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 GPRC5CQ9NQ84 441 aa17.45■□□□□ 0.38
SMPD4-220ENST00000491319 MYH11P35749 1972 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 DOCK6Q96HP0 2047 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 F8W810 466 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 INPPL1O15357 1258 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
SMPD4-220ENST00000491319 MED24O75448 989 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
SMPD4-220ENST00000491319 DSC1Q08554 894 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMPD4-220ENST00000491319 TMC5Q6UXY8 1006 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 CABP7Q86V35 215 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 CATSPER3Q86XQ3 398 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 C8orf76Q96K31 380 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 KLHL5Q96PQ7 755 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 TRIM6Q9C030 488 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-220ENST00000491319 UBN1Q9NPG3 1134 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 MIOSQ9NXC5 875 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 VWA8A3KMH1 1905 aa17.44■□□□□ 0.38
SMPD4-220ENST00000491319 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 C2CD2LO14523 706 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 LILRB3O75022 631 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 NPTXRO95502 500 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 SOD2P04179 222 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 OR1G1P47890 313 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 CLCN4P51793 760 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 NCBP1Q09161 790 aaKnown RBP17.43■□□□□ 0.38
SMPD4-220ENST00000491319 POTEGQ6S5H5 508 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 ALYREFQ86V81 257 aaKnown RBP17.43■□□□□ 0.38
SMPD4-220ENST00000491319 PPFIBP1Q86W92 1011 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 SUGP1Q8IWZ8 645 aaKnown RBP17.43■□□□□ 0.38
SMPD4-220ENST00000491319 FBXL6Q8N531 539 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 KREMEN2Q8NCW0 462 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 HERC2P3Q9BVR0 1158 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 EMILIN2Q9BXX0 1053 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 SFXN1Q9H9B4 322 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 TUFT1Q9NNX1 390 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 MRPL17Q9NRX2 175 aaKnown RBP17.43■□□□□ 0.38
SMPD4-220ENST00000491319 STK39Q9UEW8 545 aa17.43■□□□□ 0.38
SMPD4-220ENST00000491319 DBR1Q9UK59 544 aaKnown RBP17.43■□□□□ 0.38
SMPD4-220ENST00000491319 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 URODP06132 367 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 OR52Z1P0C646 297 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 XRCC6P12956 609 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMPD4-220ENST00000491319 AKAP5P24588 427 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 KLRC2P26717 231 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 ZNF174Q15697 407 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 IER5LQ5T953 404 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 SLC27A1Q6PCB7 646 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 TAS1R1Q7RTX1 841 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 RNF168Q8IYW5 571 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-220ENST00000491319 TDRD5Q8NAT2 981 aaKnown RBP17.42■□□□□ 0.38
SMPD4-220ENST00000491319 PRSS33Q8NF86 280 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 SMOC2Q9H3U7 446 aa17.42■□□□□ 0.38
SMPD4-220ENST00000491319 EFEMP2O95967 443 aa17.41■□□□□ 0.38
SMPD4-220ENST00000491319 PDGFBP01127 241 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-220ENST00000491319 ASGR2P07307 311 aa17.41■□□□□ 0.38
SMPD4-220ENST00000491319 VCPP55072 806 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms