RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 LGR5O75473 907 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 LDHAP00338 332 aaKnown RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 ASGR1P07306 291 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 HNRNPH3P31942 346 aaKnown RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 NAMPTP43490 491 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 NPTX2P47972 431 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 PURAQ00577 322 aaKnown RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 MXD4Q14582 209 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 EMC2Q15006 297 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 SPA17Q15506 151 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 MEA1Q16626 185 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 EXOC3L4Q17RC7 722 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 ARHGAP29Q52LW3 1261 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 DCAF17Q5H9S7 520 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 GJC2Q5T442 439 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 IER5Q5VY09 327 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 SESTD1Q86VW0 696 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 DEPTORQ8TB45 409 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 KCNN1Q92952 543 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 BICD1Q96G01 975 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 PPP1R13BQ96KQ4 1090 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 CCDC42Q96M95 316 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 GPR20Q99678 358 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 DEF6Q9H4E7 631 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 DHX33Q9H6R0 707 aaKnown RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 PDLIM7Q9NR12 457 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 MYO1AQ9UBC5 1043 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 TBX20Q9UMR3 447 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 PLAGL2Q9UPG8 496 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 STXBP5LQ9Y2K9 1186 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 R3HCC1Q9Y3T6 440 aaKnown RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 BZW2Q9Y6E2 419 aaKnown RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 DENND3A2RUS2 1198 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 TLR3O15455 904 aaKnown RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 ASAP2O43150 1006 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 AKAP3O75969 853 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 STBD1O95210 358 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 F2P00734 622 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 GARTP22102 1010 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 RFX1P22670 979 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 HOXD13P35453 343 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 CYP2J2P51589 502 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 EFNA5P52803 228 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 TFDP1Q14186 410 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 PTPN21Q16825 1174 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 SLC39A5Q6ZMH5 540 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 FAM43BQ6ZT52 329 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 Q7L0L9 218 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 ANKRD33Q7Z3H0 272 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 MAP4K3Q8IVH8 894 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 SLC43A3Q8NBI5 491 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 ATP8B4Q8TF62 1192 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 SPAG5Q96R06 1193 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 LSM14BQ9BX40 385 aaKnown RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 TSGA10Q9BZW7 698 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 TTYH3Q9C0H2 523 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 SENP6Q9GZR1 1112 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 POLR3FQ9H1D9 316 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 FAM207AQ9NSI2 230 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
HDAC3-210ENST00000490808 EPN1Q9Y6I3 576 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-210ENST00000490808 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 SSU72P8A0A1W2PR75 194 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 SOWAHDA6NJG2 315 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 K7ERI5 159 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ARVCFO00192 962 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 KRT86O43790 486 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 KIF5CO60282 957 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 MAFO75444 373 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-210ENST00000490808 NDUFA10O95299 355 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 GNAT1P11488 350 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ANXA13P27216 316 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ETF1P62495 437 aaKnown RBP11.16□□□□□ -0.62
HDAC3-210ENST00000490808 BFSP1Q12934 665 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 TUBB2AQ13885 445 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ZNF484Q5JVG2 852 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 RRAGAQ7L523 313 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 VPS36Q86VN1 386 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ZBTB8OSQ8IWT0 167 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 FAM81BQ96LP2 452 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 TUBB2BQ9BVA1 445 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 HAUS4Q9H6D7 363 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms