RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PYM1Q9BRP8 204 aaKnown RBP8.41□□□□□ -1.06
CLDN1-202ENST00000490800 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 TSPY26PQ9H489 355 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 AGO3Q9H9G7 860 aaKnown RBP8.41□□□□□ -1.06
CLDN1-202ENST00000490800 LRWD1Q9UFC0 647 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 PCDHA2Q9Y5H9 948 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 TTC28Q96AY4 2481 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 PTPRSQ13332 1948 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 IGKV6D-21A0A0A0MT36 114 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.4□□□□□ -1.06
CLDN1-202ENST00000490800 GOLGA6L3A6NEY3 463 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 H3BNC9 293 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 IPO5O00410 1097 aaKnown RBP8.4□□□□□ -1.06
CLDN1-202ENST00000490800 BACH1O14867 736 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 ATP4AP20648 1035 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 KLRC1P26715 233 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 CLDN10P78369 228 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 SETQ01105 290 aaPredicted RBP8.4□□□□□ -1.06
CLDN1-202ENST00000490800 SPIRE1Q08AE8 756 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 PNOCQ13519 176 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 NAALADL2Q58DX5 795 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 KANK3Q6NY19 840 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 TSHZ1Q6ZSZ6 1077 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 TRMT1LQ7Z2T5 733 aaKnown RBP8.4□□□□□ -1.06
CLDN1-202ENST00000490800 GRAMD1CQ8IYS0 662 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 FIBCD1Q8N539 461 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 IQUBQ8NA54 791 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 SLC5A5Q92911 643 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 PAGE5Q96GU1 130 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 SAMD11Q96NU1 681 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 PNMA5Q96PV4 448 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 CDK15Q96Q40 435 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 ZNF577Q9BSK1 485 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 CELF4Q9BZC1 486 aaKnown RBP8.4□□□□□ -1.06
CLDN1-202ENST00000490800 RAB34Q9BZG1 259 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 RBSNQ9H1K0 784 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 DISC1Q9NRI5 854 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 DNAAF2Q9NVR5 837 aaKnown RBP8.4□□□□□ -1.06
CLDN1-202ENST00000490800 VAV3Q9UKW4 847 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 PADI3Q9ULW8 664 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 PCDHA12Q9UN75 941 aa8.4□□□□□ -1.06
CLDN1-202ENST00000490800 A0A087WWV3 80 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 SMIM35A0A1B0GVV1 85 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 M0QZ92 97 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 SLC26A4O43511 780 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 HBP1O60381 514 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 PSMD10O75832 226 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 ADH1CP00326 375 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 CCDC192P0DO97 292 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 PLCG1P19174 1290 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 STAT6P42226 847 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 SCTRP47872 440 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 SLC26A2P50443 739 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 ATP1A2P50993 1020 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 USP4Q13107 963 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 POSTNQ15063 836 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 ZRSR1Q15695 479 aaKnown RBP8.39□□□□□ -1.07
CLDN1-202ENST00000490800 PTPROQ16827 1216 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 TMEM119Q4V9L6 283 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 RRAGBQ5VZM2 374 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 FAM160B1Q5W0V3 765 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 KRT79Q5XKE5 535 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 MIS18BP1Q6P0N0 1132 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 SASS6Q6UVJ0 657 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 CCDC60Q8IWA6 550 aaPredicted RBP8.39□□□□□ -1.07
CLDN1-202ENST00000490800 CEP57L1Q8IYX8 460 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 NME8Q8N427 588 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 SNX29Q8TEQ0 813 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 ATP8B4Q8TF62 1192 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 LINC01599Q8WXQ3 324 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
CLDN1-202ENST00000490800 MRPL38Q96DV4 380 aaKnown RBP8.39□□□□□ -1.07
CLDN1-202ENST00000490800 PLIN2Q99541 437 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 ZNF302Q9NR11 478 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 TBC1D22BQ9NU19 505 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 HOOK1Q9UJC3 728 aaKnown RBP8.39□□□□□ -1.07
CLDN1-202ENST00000490800 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 GINS2Q9Y248 185 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 TRPV2Q9Y5S1 764 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 SQORQ9Y6N5 450 aa8.39□□□□□ -1.07
CLDN1-202ENST00000490800 EML1O00423 815 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 SIAH2O43255 324 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 DGKIO75912 1065 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 RPLP2P05387 115 aaKnown RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 LINC00271P0C7V0 271 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 KCNA5P22460 613 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 BMPR1AP36894 532 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 GRM5P41594 1212 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 AFMP43652 599 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 SARSP49591 514 aaKnown RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 KRT76Q01546 638 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 DPYDQ12882 1025 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 NFX1Q12986 1120 aaKnown RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 PAK2Q13177 524 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 PPP2R5CQ13362 524 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 BTG3Q14201 252 aaPredicted RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 ELOAQ14241 798 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms