RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 SORCS3Q9UPU3 1222 aa4.51□□□□□ -1.69
CPSF3-205ENST00000489629 AHRRA9YTQ3 701 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 ITGB1P05556 798 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 LTA4HP09960 611 aaKnown RBP4.5□□□□□ -1.69
CPSF3-205ENST00000489629 PROZP22891 400 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 XPAP23025 273 aaPredicted RBP4.5□□□□□ -1.69
CPSF3-205ENST00000489629 GZMKP49863 264 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 NRG3P56975 720 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 IL2P60568 153 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 MGAT5Q09328 741 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 BROXQ5VW32 411 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 LILRA3Q8N6C8 439 aaPredicted RBP4.5□□□□□ -1.69
CPSF3-205ENST00000489629 GLB1L3Q8NCI6 653 aaPredicted RBP4.5□□□□□ -1.69
CPSF3-205ENST00000489629 RSAD2Q8WXG1 361 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 ANO3Q9BYT9 981 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 KCNH6Q9H252 994 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 ZNF768Q9H5H4 540 aaKnown RBP4.5□□□□□ -1.69
CPSF3-205ENST00000489629 COL4A3Q01955 1670 aa4.5□□□□□ -1.69
CPSF3-205ENST00000489629 ENPP3O14638 875 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 KDM1AO60341 852 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 TMEM127O75204 238 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 CLEC2LP0C7M8 214 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 GYPEP15421 78 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 BPIP17213 487 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 NANOS3P60323 173 aaKnown RBP4.49□□□□□ -1.69
CPSF3-205ENST00000489629 DUSP2Q05923 314 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 PPARAQ07869 468 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 DDB1Q16531 1140 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 C19orf54Q5BKX5 351 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 PITRM1Q5JRX3 1037 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 LMBR1LQ6UX01 489 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 ABHD15Q6UXT9 468 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 LRRC55Q6ZSA7 311 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 C11orf74Q86VG3 221 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 RASSF3Q86WH2 238 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 ZNF575Q86XF7 245 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 GLB1L2Q8IW92 636 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 CPT1CQ8TCG5 803 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 SLC5A5Q92911 643 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 NDC1Q9BTX1 674 aa4.49□□□□□ -1.69
CPSF3-205ENST00000489629 GRID2IPA4D2P6 1211 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 RECQL4O94761 1208 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 SCAF4O95104 1147 aaKnown RBP4.48□□□□□ -1.69
CPSF3-205ENST00000489629 FAM189BP81408 668 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 MEF2AQ02078 507 aaPredicted RBP4.48□□□□□ -1.69
CPSF3-205ENST00000489629 PDCD1Q15116 288 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 LY6G5CQ5SRR4 150 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 MBNL2Q5VZF2 373 aaKnown RBP4.48□□□□□ -1.69
CPSF3-205ENST00000489629 BTNL9Q6UXG8 535 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 XYLT1Q86Y38 959 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 VRK3Q8IV63 474 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 SYNE4Q8N205 404 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 OR14C36Q8NHC7 312 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 PROKR1Q8TCW9 393 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 SNX33Q8WV41 574 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 LEO1Q8WVC0 666 aaPredicted RBP4.48□□□□□ -1.69
CPSF3-205ENST00000489629 SLC46A2Q9BY10 475 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 DKK2Q9UBU2 259 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 MAPRE3Q9UPY8 281 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 CHST2Q9Y4C5 530 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 CDY2AQ9Y6F7 541 aa4.48□□□□□ -1.69
CPSF3-205ENST00000489629 LEFTY2O00292 366 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 PDE8AO60658 829 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 PPFIA4O75335 1185 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 ABHD16AO95870 558 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 GCP02774 474 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 LPLP06858 475 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 APOBEC3AP31941 199 aaPredicted RBP4.47□□□□□ -1.69
CPSF3-205ENST00000489629 APBA1Q02410 837 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 DHCR24Q15392 516 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 PLEKHG4Q58EX7 1191 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 CT83Q5H943 113 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 IQSEC1Q6DN90 963 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 CCDC62Q6P9F0 684 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 DRICH1Q6PGQ1 229 aaPredicted RBP4.47□□□□□ -1.69
CPSF3-205ENST00000489629 SYT12Q8IV01 421 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 GPR150Q8NGU9 434 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 ZG16BQ96DA0 208 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 MYEOVQ96EZ4 313 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 EPC1Q9H2F5 836 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 KCTD10Q9H3F6 313 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 KCNG1Q9UIX4 513 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 NOC2LQ9Y3T9 749 aaKnown RBP4.47□□□□□ -1.69
CPSF3-205ENST00000489629 ZMYM3Q14202 1370 aa4.47□□□□□ -1.69
CPSF3-205ENST00000489629 CENPVL1A0A0U1RR11 272 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 TMEM200CA6NKL6 621 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 RAB11FIP3O75154 756 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 MYCLP1P12525 358 aaPredicted RBP4.46□□□□□ -1.7
CPSF3-205ENST00000489629 HSP90B1P14625 803 aaKnown RBP4.46□□□□□ -1.7
CPSF3-205ENST00000489629 CTSSP25774 331 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 ADRA1BP35368 520 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 LGALS4P56470 323 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 FSTL1Q12841 308 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 PTPAQ15257 358 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 ATP13A4Q4VNC1 1196 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 TIGD2Q4W5G0 525 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 ANKS6Q68DC2 871 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 KCNV1Q6PIU1 500 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 RNF180Q86T96 592 aa4.46□□□□□ -1.7
CPSF3-205ENST00000489629 THNSL2Q86YJ6 484 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms